Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Z99714.1-201ENST00000450463 807 ntBASIC3.4□□□□□ -1.87
MSH4O15457 NF1P3-201ENST00000457709 450 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC011825.1-201ENST00000484967 388 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC068724.1-201ENST00000487100 792 ntBASIC3.4□□□□□ -1.87
MSH4O15457 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
MSH4O15457 OR2A20P-203ENST00000498397 1268 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC011352.3-201ENST00000505162 593 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC016550.1-201ENST00000505348 785 ntBASIC3.4□□□□□ -1.87
MSH4O15457 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
MSH4O15457 AP001207.1-201ENST00000524051 481 ntBASIC3.4□□□□□ -1.87
MSH4O15457 OR8K4P-201ENST00000534608 872 ntBASIC3.4□□□□□ -1.87
MSH4O15457 CYB5AP5-201ENST00000549779 389 ntBASIC3.4□□□□□ -1.87
MSH4O15457 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.4□□□□□ -1.87
MSH4O15457 AC011492.1-201ENST00000600023 315 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.4□□□□□ -1.87
MSH4O15457 AF131215.7-201ENST00000602443 707 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 AC002487.1-201ENST00000604565 994 ntBASIC3.4□□□□□ -1.87
MSH4O15457 AC103710.3-201ENST00000608157 948 ntBASIC3.4□□□□□ -1.87
MSH4O15457 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSH4O15457 U73479.1-201ENST00000618062 168 ntBASIC3.4□□□□□ -1.87
MSH4O15457 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.4□□□□□ -1.87
MSH4O15457 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MSH4O15457 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
MSH4O15457 MTND5P31-201ENST00000419366 1374 ntBASIC3.39□□□□□ -1.87
MSH4O15457 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 OR5H2-201ENST00000355273 945 ntBASIC3.39□□□□□ -1.87
MSH4O15457 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
MSH4O15457 RNU6-619P-201ENST00000365146 108 ntBASIC3.39□□□□□ -1.87
MSH4O15457 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 SNORA44-201ENST00000384584 132 ntBASIC3.39□□□□□ -1.87
MSH4O15457 RNU6-328P-201ENST00000390887 106 ntBASIC3.39□□□□□ -1.87
MSH4O15457 MTCO2P31-201ENST00000402702 684 ntBASIC3.39□□□□□ -1.87
MSH4O15457 MTCO3P31-201ENST00000405526 789 ntBASIC3.39□□□□□ -1.87
MSH4O15457 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
MSH4O15457 AC092638.1-201ENST00000411966 1275 ntBASIC3.39□□□□□ -1.87
MSH4O15457 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.39□□□□□ -1.87
MSH4O15457 RPL35AP12-201ENST00000425362 338 ntBASIC3.39□□□□□ -1.87
MSH4O15457 AC096632.1-201ENST00000427395 310 ntBASIC3.39□□□□□ -1.87
MSH4O15457 AC114973.1-201ENST00000429057 632 ntBASIC3.39□□□□□ -1.87
MSH4O15457 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH4O15457 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.39□□□□□ -1.87
MSH4O15457 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.39□□□□□ -1.87
MSH4O15457 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.39□□□□□ -1.87
MSH4O15457 AC109471.1-201ENST00000511631 612 ntBASIC3.39□□□□□ -1.87
MSH4O15457 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.39□□□□□ -1.87
MSH4O15457 AC104057.1-201ENST00000515547 497 ntBASIC3.39□□□□□ -1.87
MSH4O15457 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH4O15457 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH4O15457 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH4O15457 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.39□□□□□ -1.87
MSH4O15457 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.39□□□□□ -1.87
MSH4O15457 AC011471.1-201ENST00000585766 187 ntBASIC3.39□□□□□ -1.87
MSH4O15457 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.39□□□□□ -1.87
MSH4O15457 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.39□□□□□ -1.87
MSH4O15457 VN1R74P-201ENST00000613259 503 ntBASIC3.39□□□□□ -1.87
MSH4O15457 SEPT7P7-201ENST00000420492 1301 ntBASIC3.39□□□□□ -1.87
MSH4O15457 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
MSH4O15457 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 AL355596.1-201ENST00000565399 3996 ntBASIC3.38□□□□□ -1.87
MSH4O15457 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 RNU6-374P-201ENST00000364146 108 ntBASIC3.38□□□□□ -1.87
MSH4O15457 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MSH4O15457 NDUFB4P4-201ENST00000404822 243 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 MTCYBP24-201ENST00000420387 1106 ntBASIC3.38□□□□□ -1.87
MSH4O15457 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.38□□□□□ -1.87
MSH4O15457 RPS7P2-201ENST00000435134 607 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC015908.1-201ENST00000478739 476 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
MSH4O15457 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 AC091860.1-201ENST00000505723 432 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC118282.2-201ENST00000508739 374 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 MTCO1P30-201ENST00000515244 580 ntBASIC3.38□□□□□ -1.87
MSH4O15457 RN7SKP272-201ENST00000516988 232 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.38□□□□□ -1.87
MSH4O15457 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.38□□□□□ -1.87
MSH4O15457 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
MSH4O15457 PDCL2P2-201ENST00000533651 189 ntBASIC3.38□□□□□ -1.87
MSH4O15457 AC092470.1-201ENST00000546187 132 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms