Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 RPL23AP84-201ENST00000571193 464 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC010338.1-201ENST00000621823 717 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 AC006111.3-201ENST00000622137 383 ntBASIC1.89□□□□□ -2.11
COL6A5A8TX70 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
COL6A5A8TX70 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
COL6A5A8TX70 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 MIR423-201ENST00000362201 94 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 U3.11-201ENST00000364476 212 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 LUZP4P1-201ENST00000415420 344 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 AL035551.1-201ENST00000446931 348 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 SEPT7P3-201ENST00000455017 621 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 CYCSP20-201ENST00000473154 315 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 OR4T1P-201ENST00000554933 911 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 AC110741.2-201ENST00000605278 268 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 AC091046.2-201ENST00000620775 665 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 AP000526.1-201ENST00000603308 1388 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 BX679664.1-201ENST00000434429 253 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 RN7SL442P-201ENST00000473804 320 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 FAM92A1P2-202ENST00000504766 877 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 TRMT112P2-201ENST00000512910 132 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 RNU4ATAC3P-201ENST00000516699 126 ntBASIC1.88□□□□□ -2.11
COL6A5A8TX70 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.88□□□□□ -2.11
COL6A5A8TX70 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
COL6A5A8TX70 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 EIF5P1-201ENST00000400019 1231 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC245054.2-201ENST00000415639 319 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 RPS15AP17-201ENST00000470598 390 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 RPL36AP51-201ENST00000487216 318 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 RN7SL633P-201ENST00000488974 297 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 NARSP2-201ENST00000518524 679 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 OR8L1P-201ENST00000534005 955 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 MIR4285-201ENST00000581001 85 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A5A8TX70 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC107081.3-201ENST00000612715 2034 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 MIR2114-201ENST00000516645 80 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 MIR4635-201ENST00000583759 79 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 RNU6-37P-201ENST00000362692 107 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 RNU6-11P-201ENST00000364234 107 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 RNU1-91P-201ENST00000364746 163 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A5A8TX70 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
COL6A5A8TX70 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 AL391813.2-201ENST00000609113 322 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 AC103710.2-201ENST00000609912 942 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 RMST_2.1-201ENST00000617263 136 ntBASIC1.87□□□□□ -2.11
COL6A5A8TX70 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.87□□□□□ -2.11
COL6A5A8TX70 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A5A8TX70 ELL2P4-201ENST00000446870 1376 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A5A8TX70 MTND5P3-201ENST00000438536 1800 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A5A8TX70 OR52B1P-201ENST00000316506 909 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 RNA5SP502-201ENST00000362694 119 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 SNORD56.3-201ENST00000363507 71 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 U3.6-201ENST00000363622 211 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 GLRXP1-201ENST00000423261 334 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AL365396.1-201ENST00000430854 671 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 EXTL2P1-201ENST00000446218 416 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 FABP5P12-201ENST00000515543 389 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 AL031274.2-201ENST00000599419 203 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AL078603.1-201ENST00000603824 313 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC067747.1-201ENST00000608026 250 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC010378.1-201ENST00000619270 362 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms