Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC108751.5-201ENST00000492880 1336 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.149-201ENST00000363558 117 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RNA5SP30-201ENST00000365552 115 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RNU6-339P-201ENST00000384310 107 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MT-TG-201ENST00000387429 68 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RNA5SP219-201ENST00000390940 113 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MIR450B-201ENST00000401182 78 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RPL19P16-201ENST00000433839 588 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MIR2053-201ENST00000459295 91 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RN7SL583P-201ENST00000475692 287 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RN7SL570P-201ENST00000484405 292 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AP002453.1-201ENST00000492327 668 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC009120.1-201ENST00000493458 473 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 SNORA25.10-201ENST00000515926 124 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 RNA5SP473-201ENST00000516402 125 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AL121576.1-201ENST00000556055 276 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC009852.2-201ENST00000567898 485 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC106782.4-201ENST00000568264 210 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 U2.17-201ENST00000611454 95 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 SNHG22-203ENST00000617833 660 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 PLCE1P1-201ENST00000622094 305 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AC119674.1-207ENST00000641355 633 ntBASIC4.83□□□□□ -1.64
SHISA3A0PJX4 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.83□□□□□ -1.64
SHISA3A0PJX4 KPNA2P1-201ENST00000458289 1591 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC027228.2-201ENST00000567141 2154 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC027287.1-201ENST00000553115 1453 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC004817.4-201ENST00000602396 3625 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 SNORD3E-201ENST00000362899 217 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.252-201ENST00000364556 101 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.399-201ENST00000383955 105 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 MIR130B-202ENST00000385018 82 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 MIR1275-201ENST00000408770 80 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RNU4-65P-201ENST00000410473 140 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 Y_RNA.646-201ENST00000410980 101 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RPL21P24-201ENST00000413752 448 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 BX682237.1-201ENST00000415016 335 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC093155.2-201ENST00000420734 937 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC007161.1-204ENST00000423039 460 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RPL7P28-201ENST00000437739 740 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC073109.1-201ENST00000445066 978 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RN7SL170P-201ENST00000487098 295 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 COX6B1P2-201ENST00000489624 230 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC010350.1-201ENST00000504908 231 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC097473.1-201ENST00000508142 408 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RNU6-764P-201ENST00000516396 105 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 RNA5SP441-201ENST00000516809 88 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC011853.1-201ENST00000518911 454 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC090115.3-201ENST00000553218 849 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC026826.3-201ENST00000561747 158 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 MIR4311-201ENST00000580794 100 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 MIR3941-201ENST00000582572 103 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC008521.1-201ENST00000587471 187 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AP000769.2-201ENST00000602344 396 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AL138889.2-201ENST00000603883 242 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC009570.1-201ENST00000609599 745 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 AC006329.2-201ENST00000611491 394 ntBASIC4.82□□□□□ -1.64
SHISA3A0PJX4 CYP4F35P-202ENST00000636121 390 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms