Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 RNU1-64P-201ENST00000365443 163 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL035405.1-201ENST00000400795 710 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL357075.1-201ENST00000404107 726 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 SNORA11B-201ENST00000408175 129 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 RNA5SP274-201ENST00000410484 108 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL024507.1-201ENST00000412741 274 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL049610.1-201ENST00000423374 372 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 NPM1P13-201ENST00000452663 865 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC244505.3-201ENST00000454598 187 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 snoU13.24-201ENST00000458998 104 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 PABPC1P3-201ENST00000469174 459 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 TRAV31-201ENST00000502780 342 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC084024.2-201ENST00000503480 791 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 RNU6-1073P-201ENST00000517182 106 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC019227.1-201ENST00000526902 510 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC008507.2-201ENST00000588402 1176 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AP003973.1-201ENST00000604639 691 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC099785.1-201ENST00000605697 437 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC092354.2-201ENST00000607786 514 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AC090425.2-201ENST00000608818 501 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 AL590282.1-201ENST00000610379 1136 ntBASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TCRBV9S1A1TA0A576 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC073325.2-201ENST00000339545 159 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 RNA5SP258-201ENST00000362750 119 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 RNU6-1181P-201ENST00000384191 106 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AL133264.1-201ENST00000407157 562 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AL136133.1-201ENST00000413694 376 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 HSFY1P1-201ENST00000423928 1178 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC127537.2-201ENST00000439258 465 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 HMGN1P5-201ENST00000448591 263 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 MRPL42P4-201ENST00000453267 443 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 RN7SL330P-201ENST00000469709 307 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC010301.1-201ENST00000473936 355 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 VPS26AP1-201ENST00000483197 979 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 RPS4XP13-201ENST00000483219 789 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC110794.1-201ENST00000505816 425 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 HMGB3P15-201ENST00000507326 574 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AP001317.1-201ENST00000531194 960 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC044913.1-201ENST00000557200 430 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 SULT1C2P1-202ENST00000562418 459 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC090666.1-201ENST00000578241 445 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC093227.2-201ENST00000589357 285 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AP002802.2-201ENST00000605877 235 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC006023.2-201ENST00000609916 167 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC006963.1-201ENST00000624003 1052 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC026634.1-201ENST00000634369 198 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 MTND2P41-201ENST00000637599 773 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 AC000367.1-201ENST00000452711 1766 ntBASIC3.09□□□□□ -1.91
TCRBV9S1A1TA0A576 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.09□□□□□ -1.92
TCRBV9S1A1TA0A576 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV9S1A1TA0A576 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TCRBV9S1A1TA0A576 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
TCRBV9S1A1TA0A576 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.08□□□□□ -1.92
TCRBV9S1A1TA0A576 SNORA51.4-201ENST00000364993 124 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms