Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 RN7SKP234-201ENST00000517173 224 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 IGLVIV-53-201ENST00000520107 367 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 PTP4A1P6-201ENST00000531034 478 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 CYCSP29-201ENST00000533731 318 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 OR6C73P-201ENST00000546432 358 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC053481.3-201ENST00000577881 843 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MIR548AB-201ENST00000584917 84 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC068790.6-201ENST00000602558 258 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL390208.1-201ENST00000605885 644 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL139286.2-201ENST00000606838 396 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AC092354.2-201ENST00000607786 514 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MIR6868-201ENST00000611215 58 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL603839.4-201ENST00000624658 1005 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 AL356121.2-201ENST00000624715 780 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 NUP58P1-201ENST00000502546 1738 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 UBE3AP2-201ENST00000429033 2259 ntBASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TCRBV7S3A2A0A539 PABPC1P7-201ENST00000413177 1513 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MTND5P29-201ENST00000458676 1807 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 Y_RNA.359-201ENST00000365498 102 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 SNORD82-201ENST00000365530 70 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MTND4LP20-201ENST00000402379 270 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MTATP6P27-201ENST00000416987 621 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 Z97055.1-201ENST00000419730 712 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC009480.2-201ENST00000422916 432 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC127537.2-201ENST00000439258 465 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 SNORD42A-201ENST00000459584 64 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC105137.1-201ENST00000484355 562 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 RN7SL271P-201ENST00000487601 295 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 PRELID3BP7-201ENST00000503606 469 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC093677.1-201ENST00000514414 678 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC093853.1-201ENST00000515689 483 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 ZNF415P1-201ENST00000582279 1166 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 BBIP1P1-201ENST00000602999 279 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 MIR8059-201ENST00000620427 81 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 ZNF734P-201ENST00000419494 1534 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 TEX21P-201ENST00000447107 1476 ntBASIC4.05□□□□□ -1.76
TCRBV7S3A2A0A539 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 IPO8P1-201ENST00000455509 3109 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 RNY4P24-201ENST00000362735 96 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 MIR1251-201ENST00000408552 70 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 MTCO1P17-201ENST00000411522 491 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 RPL31P45-201ENST00000419532 356 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AL513174.1-201ENST00000423182 629 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 AC007742.1-201ENST00000425789 329 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 OR5BE1P-201ENST00000425977 939 ntBASIC4.04□□□□□ -1.76
TCRBV7S3A2A0A539 PSMA6P3-201ENST00000428242 164 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms