Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MTND4P9-201ENST00000507819 1346 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RNU6-1243P-201ENST00000364028 107 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RNU6-444P-201ENST00000383988 108 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RNU6-298P-201ENST00000390888 96 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RPL7P27-201ENST00000403775 720 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RPL5P18-201ENST00000406671 891 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MIR1183-201ENST00000408856 89 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 BTF3P8-201ENST00000414577 526 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AL354692.1-201ENST00000423044 315 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 PTP4A1P7-201ENST00000423476 514 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MTCYBP32-201ENST00000427945 1084 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC012497.1-201ENST00000429392 575 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 Z77249.1-201ENST00000444622 1175 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RPL29P29-201ENST00000448725 423 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 FCF1P6-201ENST00000456841 595 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AP000893.1-201ENST00000474462 794 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RPS3AP14-201ENST00000483907 780 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC068724.1-201ENST00000487100 792 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC078817.1-201ENST00000492623 435 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 OR2A20P-203ENST00000498397 1268 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC093752.1-206ENST00000511823 336 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MTCO1P30-201ENST00000515244 580 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RNA5SP217-201ENST00000515959 91 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 SNORA19.3-201ENST00000516165 130 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 RN7SKP272-201ENST00000516988 232 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC019227.1-201ENST00000526902 510 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MTCYBP28-201ENST00000566728 1132 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC006270.2-201ENST00000578523 652 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MIR4666A-201ENST00000580160 79 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 BNIP3P27-201ENST00000599991 412 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 YWHAQP7-201ENST00000603536 658 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 VN1R74P-201ENST00000613259 503 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC121761.2-201ENST00000617300 689 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 AC084824.4-201ENST00000620106 731 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 MIR4496-201ENST00000635896 61 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 EXOC5P1-201ENST00000510543 1969 ntBASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SMIM28A0A1B0GU29 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC118273.1-201ENST00000525324 3006 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC073325.2-201ENST00000339545 159 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 RPS7P9-201ENST00000414704 586 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC006960.1-201ENST00000419980 153 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 PTP4A1P5-201ENST00000420305 455 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 COX6CP18-201ENST00000448769 222 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC006539.3-201ENST00000454258 129 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AP001486.1-201ENST00000463339 476 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC117440.1-201ENST00000474107 571 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC087879.1-201ENST00000474343 374 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AP001086.1-201ENST00000494882 321 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC118282.2-201ENST00000508739 374 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 TMEM248P1-201ENST00000510579 951 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC008837.1-201ENST00000511513 412 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC093755.1-201ENST00000512950 1023 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-488P-201ENST00000515918 99 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 RNU6-885P-201ENST00000516607 104 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 snoZ278.1-201ENST00000517059 112 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 AP004242.1-201ENST00000533701 349 ntBASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMIM28A0A1B0GU29 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms