Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 AC017083.3-201ENST00000609955 700 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL022401.1-201ENST00000619498 108 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC00622-201ENST00000562811 1570 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 DDX18P3-201ENST00000404856 2007 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC009951.1-201ENST00000623674 2614 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 MTCO1P9-201ENST00000505577 1534 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 THAP12P5-201ENST00000405864 2275 ntBASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
IGHV4-28A0A0C4DH34 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC009643.2-201ENST00000603543 1448 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 Y_RNA.390-201ENST00000383932 102 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RNY3P14-201ENST00000384309 102 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC013442.1-201ENST00000397347 228 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RN7SKP247-201ENST00000411094 308 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RN7SKP100-201ENST00000411258 284 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 HMGB3P20-201ENST00000417997 600 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 FABP7P1-201ENST00000424004 391 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPL23AP30-201ENST00000432419 501 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 BTF3P10-201ENST00000433415 495 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 WASF1P1-201ENST00000447560 1131 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 PPIAP3-201ENST00000450588 505 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 NANOGP10-201ENST00000453325 895 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC108059.3-201ENST00000456388 214 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC006967.1-201ENST00000467608 589 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC090686.1-201ENST00000481577 749 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 IGLV2-34-201ENST00000490007 283 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC108145.1-201ENST00000503770 153 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC114797.1-201ENST00000514003 728 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 Y_RNA.693-201ENST00000516641 110 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 OR4R3P-201ENST00000525084 838 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP000857.1-201ENST00000532151 543 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 OR4K8P-201ENST00000578842 1048 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 MIR548S-201ENST00000581352 82 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP001429.1-201ENST00000602568 530 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 Z84480.1-201ENST00000605131 311 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AL121932.1-201ENST00000605542 214 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 HMGN2P28-201ENST00000606102 262 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AP001596.2-201ENST00000608410 312 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC007497.1-201ENST00000610421 561 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
IGHV4-28A0A0C4DH34 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.47□□□□□ -1.85
IGHV4-28A0A0C4DH34 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms