Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 CYCSP38-201ENST00000559840 322 ntBASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 AL355812.1-201ENST00000603215 216 ntBASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 TUG1_2.1-201ENST00000614234 87 ntBASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.71□□□□□ -1.5
HRH3Q9Y5N1 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 ZNF72P-201ENST00000425869 1908 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.64-201ENST00000362845 102 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.126-201ENST00000363382 111 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.151-201ENST00000363566 112 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SNORA23-201ENST00000365128 182 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 LCN1P2-201ENST00000372030 223 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SNORA51.9-201ENST00000384295 124 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SNORA51.11-201ENST00000384442 131 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MIR625-201ENST00000385047 85 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AL138885.1-201ENST00000405921 675 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MIR548H3-201ENST00000408771 118 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RPS29P14-201ENST00000431518 171 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC023141.3-201ENST00000436698 278 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC009963.3-201ENST00000458090 486 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RNU7-187P-201ENST00000458985 68 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RNU6-677P-201ENST00000516914 101 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SNORA81.3-201ENST00000517283 198 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC144568.1-201ENST00000520139 137 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC084783.1-201ENST00000565846 910 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RNU4ATAC-201ENST00000580972 127 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MIR3614-201ENST00000581261 86 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MIR4273-201ENST00000582824 84 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 VN1R91P-201ENST00000594377 169 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RPS29P30-201ENST00000600975 111 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC130454.1-201ENST00000622948 401 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 SMG1P7-201ENST00000565246 2704 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 AP005435.3-201ENST00000531260 3198 ntBASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.7□□□□□ -1.5
HRH3Q9Y5N1 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AP001284.1-201ENST00000528393 2118 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC025470.1-201ENST00000510053 2032 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC000374.1-201ENST00000434698 1745 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC011369.2-201ENST00000624423 1567 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.270-201ENST00000364693 104 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 MIR130B-202ENST00000385018 82 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SYF2P2-201ENST00000417620 583 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AL353997.1-201ENST00000432936 108 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 NEFMP1-201ENST00000443423 1006 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 RPL7P5-201ENST00000471472 736 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 TRBVB-201ENST00000477100 408 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 RN7SL326P-201ENST00000477493 296 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 KHDC1P1-201ENST00000511053 508 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 RNU6-390P-201ENST00000516259 103 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 Y_RNA.710-201ENST00000516975 110 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 RNU6-111P-201ENST00000517179 105 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 CR383656.7-201ENST00000548164 174 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC079905.1-201ENST00000549280 475 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AP001823.1-201ENST00000604056 1003 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 AC104763.2-201ENST00000604179 382 ntBASIC5.69□□□□□ -1.5
HRH3Q9Y5N1 HMGB1P50-201ENST00000605814 607 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms