Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 AL442163.2-201ENST00000553912 710 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AL157394.1-201ENST00000562983 1224 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC107954.1-201ENST00000565906 727 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC012182.1-201ENST00000570133 895 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC012119.1-201ENST00000603184 222 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC018618.2-201ENST00000604770 446 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 OR2BH1P-201ENST00000608850 864 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 Z99129.2-201ENST00000619967 314 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC073348.1-201ENST00000623002 331 ntBASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HDGFL3Q9Y3E1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 DEFB109C-201ENST00000382575 264 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 DEFB109B-201ENST00000382656 264 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 RNU6-1181P-201ENST00000384191 106 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 MIR491-201ENST00000384877 84 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 SNORA26.7-201ENST00000391288 122 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AL121972.1-201ENST00000402023 252 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 SFR1P1-201ENST00000403720 688 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 U3.42-201ENST00000408746 214 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC092685.1-201ENST00000447960 1243 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 RSL24D1P3-201ENST00000449255 495 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC008885.2-201ENST00000509506 930 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 OR5AK3P-201ENST00000527486 1297 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 NOP56P3-201ENST00000549457 385 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AL121603.1-201ENST00000553815 142 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 GTF2IP8-201ENST00000560687 584 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC090312.2-201ENST00000582687 378 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AL009028.1-201ENST00000604895 802 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC006963.1-201ENST00000624003 1052 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
HDGFL3Q9Y3E1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 DSTNP4-201ENST00000399472 474 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RNA5SP129-201ENST00000410276 118 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC073264.1-201ENST00000411508 416 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RPL7P8-201ENST00000411964 730 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 HSPE1P1-201ENST00000421494 318 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RPL35AP12-201ENST00000425362 338 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RPL21P2-201ENST00000440049 481 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 S100A11P2-201ENST00000467589 312 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RNU6-760P-201ENST00000516078 97 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 RNU1-61P-201ENST00000516107 151 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 IGKV2D-36-201ENST00000518643 226 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 MIR4504-201ENST00000577413 92 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC015871.2-201ENST00000603605 948 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC079610.2-201ENST00000604818 690 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC093732.2-201ENST00000607950 274 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 CR589904.2-201ENST00000612533 440 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC010338.1-201ENST00000621823 717 ntBASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
HDGFL3Q9Y3E1 AC104446.1-201ENST00000613728 1321 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms