Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 CDC27P3-201ENST00000635418 1910 ntBASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
ZC3H4Q9UPT8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-26P-201ENST00000383985 107 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-1032P-201ENST00000384100 107 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-310P-201ENST00000384655 107 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 SSXP10-201ENST00000402595 565 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RPL23AP43-201ENST00000446445 471 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 GAPDHP25-201ENST00000447061 1001 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 Z92846.1-201ENST00000456203 268 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL136126.1-201ENST00000473603 402 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RPL7P43-201ENST00000478876 753 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AF213884.1-201ENST00000488102 463 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC005726.1-201ENST00000494679 427 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RPS4XP20-201ENST00000505751 772 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 MRPS35P2-201ENST00000508242 191 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC016559.2-201ENST00000510759 359 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-347P-201ENST00000516658 105 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 IGLV3-24-201ENST00000517477 197 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 IGKV1-32-201ENST00000519290 311 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC134698.5-201ENST00000519444 336 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL110118.1-201ENST00000553543 400 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 MYL12BP1-201ENST00000569826 507 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 TVP23CP2-201ENST00000571473 623 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 MIR4284-201ENST00000578924 81 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC092747.3-201ENST00000603769 301 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC103710.2-201ENST00000609912 942 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 MIR6780A-201ENST00000615089 68 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC006484.1-201ENST00000435086 1884 ntBASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.35
ZC3H4Q9UPT8 AC009902.3-201ENST00000606235 2172 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AL139276.1-201ENST00000311910 1001 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 RNU6-1040P-201ENST00000383974 107 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 Y_RNA.482-201ENST00000384377 111 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 UBE2V1P2-201ENST00000397758 440 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC119751.6-201ENST00000416712 186 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 RPS26P47-201ENST00000427219 348 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 PSMA6P3-201ENST00000428242 164 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC020550.1-201ENST00000447385 163 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 RPL7L1P1-201ENST00000448259 785 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 SUMO1P2-201ENST00000452524 304 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 RPS23P7-201ENST00000466210 444 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC026801.2-201ENST00000515352 425 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 SNORA25.10-201ENST00000515926 124 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 SCARNA16.4-201ENST00000516956 187 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 MTCO3P23-201ENST00000561363 289 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC104662.1-201ENST00000604448 511 ntBASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
ZC3H4Q9UPT8 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms