Protein–RNA interactions for Protein: Q9UH17

APOBEC3B, DNA dC->dU-editing enzyme APOBEC-3B, humanhuman

Known RBP Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3BQ9UH17 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC023347.2-201ENST00000433994 462 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 YWHAZP8-201ENST00000436935 731 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RPL29P29-201ENST00000448725 423 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RPL7P38-201ENST00000488396 739 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC112198.1-201ENST00000505369 1220 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC008885.2-201ENST00000509506 930 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RPL7L1P13-201ENST00000511702 739 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RNU4-60P-201ENST00000517239 135 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC010198.2-201ENST00000550612 259 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SYF2P1-201ENST00000550658 413 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 MTCYBP23-201ENST00000558717 1102 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AP001542.2-201ENST00000593141 364 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC008687.2-201ENST00000597865 520 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 CKS1BP3-201ENST00000600888 237 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AL392112.1-201ENST00000605115 829 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC024060.1-201ENST00000607052 494 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 PART1_2.1-201ENST00000612397 250 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
APOBEC3BQ9UH17 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 MTND4P8-201ENST00000514997 1362 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 ANKRD36P1-201ENST00000344424 659 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 HNRNPDP2-201ENST00000406475 478 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-584P-201ENST00000410350 95 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 EI24P1-201ENST00000416584 867 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC114973.1-201ENST00000429057 632 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 CKS1BP5-201ENST00000434172 273 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL357552.1-201ENST00000445254 415 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 HMGB1P48-201ENST00000446155 598 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL606517.1-201ENST00000446914 387 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 NPM1P13-201ENST00000452663 865 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 RPS29P2-201ENST00000479278 136 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC126121.1-201ENST00000482313 553 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-202P-201ENST00000515998 96 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 MTCO3P15-201ENST00000526563 574 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 LRRC6P1-201ENST00000532188 885 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC044913.1-201ENST00000557200 430 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 RPL21P12-201ENST00000559810 515 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 BPTFP1-201ENST00000579209 492 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 MTCO2P2-201ENST00000591258 225 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL445435.1-201ENST00000604232 665 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AL162713.1-201ENST00000604480 262 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC026790.2-201ENST00000606282 430 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 AC243756.2-201ENST00000618406 463 ntBASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
APOBEC3BQ9UH17 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 SGO1P1-201ENST00000603525 1447 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-224P-201ENST00000384055 107 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 RNU6-1293P-201ENST00000384077 107 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 SNORA51.12-201ENST00000384448 134 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 MIR128-1-201ENST00000384921 82 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 MIR16-1-201ENST00000385271 89 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 EIF5P1-201ENST00000400019 1231 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 GSTA8P-201ENST00000404253 637 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC096664.2-201ENST00000411843 406 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 OR51A3P-201ENST00000413596 924 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 OR10R1P-201ENST00000441524 1141 ntBASIC3.29□□□□□ -1.88
APOBEC3BQ9UH17 MTCYBP42-201ENST00000444653 1130 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms