Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL772161.1-201ENST00000439130 476 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 RPS20P20-201ENST00000460498 340 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 HMGB1P21-201ENST00000502313 581 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC021146.1-201ENST00000511202 716 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 RNU6-835P-201ENST00000516974 104 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC008033.2-201ENST00000542626 177 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 TVP23CP2-201ENST00000571473 623 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC007566.2-201ENST00000603642 413 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC004853.1-201ENST00000604902 698 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AP001521.2-201ENST00000608772 546 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC006504.8-201ENST00000621046 635 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC024940.5-201ENST00000622889 474 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC093648.1-201ENST00000623546 606 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ZNF680P1-201ENST00000436625 1469 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 NEAT1-202ENST00000501122 22743 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 AC009902.3-201ENST00000606235 2172 ntBASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
KCMF1Q9P0J7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 Y_RNA.356-201ENST00000365475 113 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RNU6-108P-201ENST00000365558 107 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 MIR1-2-201ENST00000384961 85 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 SNORA68.2-201ENST00000391263 128 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 ENSAP1-201ENST00000392855 326 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL357515.1-201ENST00000402967 542 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 CHEK2P3-201ENST00000416118 248 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RGS17P1-201ENST00000423358 553 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RPL12P34-201ENST00000424532 479 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 PRPF38AP2-201ENST00000438179 851 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RPL23AP56-201ENST00000460778 453 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RN7SL517P-201ENST00000462240 305 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 SCARNA24.1-201ENST00000516465 137 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 OR4P1P-201ENST00000530808 1136 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 MIR3934-201ENST00000579806 107 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC098848.2-201ENST00000588023 330 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC011487.3-201ENST00000593607 453 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC115621.1-201ENST00000604653 858 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 RNU4-89P-201ENST00000607443 133 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 OR6R2P-201ENST00000609216 300 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AC128687.2-201ENST00000609657 566 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL121757.2-201ENST00000611223 313 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KCMF1Q9P0J7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
KCMF1Q9P0J7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms