Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 RN7SKP156-201ENST00000410308 342 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 RPL7P52-201ENST00000449200 742 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC096751.1-202ENST00000502691 1067 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 RNY4P37-201ENST00000516225 96 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 RN7SKP209-201ENST00000516888 304 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 DEFB131D-201ENST00000526803 184 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC091515.1-201ENST00000548110 679 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC107016.1-201ENST00000550463 337 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC006960.3-201ENST00000561845 705 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 VN1R82P-201ENST00000601481 356 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC068790.5-201ENST00000602741 355 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC012669.1-201ENST00000603209 283 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AL592221.1-201ENST00000605266 382 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC005344.1-201ENST00000613391 459 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AL596245.1-201ENST00000618994 362 ntBASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.16□□□□□ -1.74
BLOC1S4Q9NUP1 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.15□□□□□ -1.74
BLOC1S4Q9NUP1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
BLOC1S4Q9NUP1 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BLOC1S4Q9NUP1 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
BLOC1S4Q9NUP1 FAM35DP-201ENST00000323387 2712 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-28P-201ENST00000362378 107 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-173P-201ENST00000364215 104 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 RNU6-1242P-201ENST00000391052 103 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 DHFRP6-201ENST00000401776 268 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 TPMTP2-201ENST00000414372 726 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 RPL7P30-201ENST00000420888 709 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC007742.1-201ENST00000425789 329 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 ELOCP26-201ENST00000436067 329 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 HMGN2P16-201ENST00000456802 261 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC023424.2-201ENST00000493479 777 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 KLHL2P1-201ENST00000508691 521 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC026402.1-201ENST00000513642 170 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 RN7SKP289-201ENST00000517244 295 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC023050.2-201ENST00000544968 387 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 MIR5187-201ENST00000583479 76 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC244505.7-201ENST00000599675 272 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AC015967.1-201ENST00000619893 476 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 AP000776.1-201ENST00000530032 1663 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
BLOC1S4Q9NUP1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 MTND5P24-201ENST00000438892 1767 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AP004289.2-201ENST00000444413 1457 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 SNORA57.1-201ENST00000391227 145 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 RPL32P23-201ENST00000397237 405 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 MIR1183-201ENST00000408856 89 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 RNU4-65P-201ENST00000410473 140 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AL953862.1-201ENST00000423016 168 ntBASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
BLOC1S4Q9NUP1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms