Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTND4LP22-201ENST00000508209 276 ntBASIC2.78□□□□□ -1.96
CISHQ9NSE2 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 RNA5SP282-201ENST00000516355 108 ntBASIC2.78□□□□□ -1.96
CISHQ9NSE2 RN7SKP277-201ENST00000516895 283 ntBASIC2.78□□□□□ -1.96
CISHQ9NSE2 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 AC002076.2-201ENST00000617362 122 ntBASIC2.78□□□□□ -1.96
CISHQ9NSE2 MIR6864-201ENST00000617935 70 ntBASIC2.78□□□□□ -1.96
CISHQ9NSE2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CISHQ9NSE2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CISHQ9NSE2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CISHQ9NSE2 FAM35BP-202ENST00000497389 3337 ntBASIC2.78□□□□□ -1.97
CISHQ9NSE2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.78□□□□□ -1.97
CISHQ9NSE2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
CISHQ9NSE2 AP000526.1-201ENST00000603308 1388 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CISHQ9NSE2 SNORD62.1-201ENST00000362541 86 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 SNORD21-201ENST00000383953 95 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RNU6-31P-201ENST00000384388 108 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RNA5SP210-201ENST00000391034 120 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RNU2-21P-201ENST00000410368 188 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RN7SKP123-201ENST00000410732 291 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RNA5SP184-201ENST00000411071 108 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AL109933.2-201ENST00000452651 260 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 AC096992.1-201ENST00000459808 709 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 HMGN1P8-201ENST00000463578 288 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 HIGD1AP3-201ENST00000515857 278 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 MTCYBP41-201ENST00000528913 1123 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 MIR548Y-201ENST00000582739 110 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AL451074.6-201ENST00000608512 729 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 AC006023.2-201ENST00000609916 167 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 MIR6733-201ENST00000635723 61 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 MIR4496-201ENST00000635896 61 ntBASIC2.77□□□□□ -1.97
CISHQ9NSE2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.77□□□□□ -1.97
CISHQ9NSE2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 RNU6-670P-201ENST00000364312 104 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 RNU1-100P-201ENST00000365255 165 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC093151.1-201ENST00000427711 313 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 GSTA11P-201ENST00000452866 669 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 RPS15AP1-201ENST00000457423 391 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 NF1P3-201ENST00000457709 450 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC093663.2-201ENST00000484625 313 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC005351.1-201ENST00000511152 786 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC243972.3-201ENST00000539655 198 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC016877.3-201ENST00000606778 504 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 AC135803.1-201ENST00000608748 565 ntBASIC2.76□□□□□ -1.97
CISHQ9NSE2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CISHQ9NSE2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AL139039.1-201ENST00000401900 692 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 MRPL50P2-201ENST00000416821 482 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 RPL23AP15-201ENST00000450202 459 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 RPL21P104-201ENST00000464143 478 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 RNA5SP385-201ENST00000515947 110 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 AC123904.3-201ENST00000547218 814 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AL109653.1-201ENST00000603091 248 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AC092608.2-201ENST00000624427 218 ntBASIC2.75□□□□□ -1.97
CISHQ9NSE2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CISHQ9NSE2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CISHQ9NSE2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.75□□□□□ -1.97
CISHQ9NSE2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CISHQ9NSE2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms