Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MIR4325-201ENST00000583049 90 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 RNU6-156P-201ENST00000621869 107 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AL109659.3-201ENST00000624985 950 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF41Q9H4P4 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
RNF41Q9H4P4 AC107081.3-201ENST00000612715 2034 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 SNORA71.1-201ENST00000364523 117 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 U3.15-201ENST00000365398 212 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RNU6-761P-201ENST00000384148 107 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 SNORA54-201ENST00000384281 123 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RNU6-925P-201ENST00000384629 104 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RNU6-1151P-201ENST00000384684 107 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 MIR16-1-201ENST00000385271 89 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 MTCYBP15-201ENST00000433123 1127 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RPL23AP83-201ENST00000434984 473 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AL671855.1-201ENST00000446875 1203 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 CEACAMP4-201ENST00000457676 421 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC010468.1-201ENST00000461022 817 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 NAP1L1P3-201ENST00000462291 880 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 TRAV31-201ENST00000502780 342 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 KCTD9P5-201ENST00000504141 1170 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 OR5H4P-201ENST00000510851 923 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC093752.1-206ENST00000511823 336 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RNU6-1028P-201ENST00000517164 93 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 HIGD1AP6-201ENST00000521833 279 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC104417.1-201ENST00000523974 751 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 MIR4666A-201ENST00000580160 79 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC083899.3-201ENST00000603413 594 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC113194.1-201ENST00000606037 500 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC024060.1-201ENST00000607052 494 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC013437.2-201ENST00000639587 677 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC093010.3-201ENST00000570269 15214 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 SGO1P1-201ENST00000603525 1447 ntBASIC3.61□□□□□ -1.83
RNF41Q9H4P4 AC138393.1-206ENST00000540997 1886 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC016716.1-201ENST00000265882 708 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 RPL7P27-201ENST00000403775 720 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 RNA5SP274-201ENST00000410484 108 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 RNU6-272P-201ENST00000411028 104 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 HMGB3P23-201ENST00000414981 585 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC234064.1-201ENST00000436312 247 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC125238.1-201ENST00000448842 249 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 HMGB1P1-201ENST00000522557 636 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AP001180.3-201ENST00000582221 145 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC245884.10-201ENST00000597355 337 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 BNIP3P11-201ENST00000603878 563 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC091488.1-201ENST00000604239 660 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC010680.4-201ENST00000605334 543 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AL365400.2-201ENST00000605604 902 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AL121652.1-201ENST00000608851 448 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 AC104985.3-201ENST00000623479 597 ntBASIC3.6□□□□□ -1.83
RNF41Q9H4P4 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.6□□□□□ -1.83
RNF41Q9H4P4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms