Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RNU5A-7P-201ENST00000515979 116 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC068339.2-201ENST00000534395 618 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 H3F3AP1-201ENST00000559984 334 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC008507.1-201ENST00000587506 734 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AL365400.2-201ENST00000605604 902 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC005156.1-201ENST00000613371 573 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AL138955.1-201ENST00000622881 1040 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC024595.1-201ENST00000623088 387 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 AC010872.1-201ENST00000624225 675 ntBASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.31□□□□□ -1.88
NXF3Q9H4D5 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 MTCO1P24-201ENST00000515438 1558 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 MIR591-201ENST00000385290 95 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 U3.26-201ENST00000391236 204 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 RPL22P22-201ENST00000395439 379 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 EIF5P1-201ENST00000400019 1231 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 PRRC2CP1-201ENST00000404428 159 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 RNU2-21P-201ENST00000410368 188 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 EI24P1-201ENST00000416584 867 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 RPS15AP40-201ENST00000419621 391 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC241520.1-201ENST00000422654 1099 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC073310.1-201ENST00000423226 1033 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 HMGB1P45-201ENST00000435986 653 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC025750.2-201ENST00000442609 450 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 HMGN1P5-201ENST00000448591 263 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 OR2A20P-203ENST00000498397 1268 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC104027.1-201ENST00000521887 300 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC019227.1-201ENST00000526902 510 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC010735.1-201ENST00000567305 1026 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC104072.1-201ENST00000568817 668 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC012254.4-201ENST00000588843 273 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC009948.4-201ENST00000604692 675 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AC018645.2-201ENST00000609151 472 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 FRG1HP-204ENST00000617940 757 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 AL137790.1-201ENST00000634283 177 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 ZNF826P-207ENST00000622273 1910 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 MTND5P24-201ENST00000438892 1767 ntBASIC3.3□□□□□ -1.88
NXF3Q9H4D5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
NXF3Q9H4D5 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC021755.1-201ENST00000559747 1447 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 Y_RNA.111-201ENST00000363248 100 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 SNORA80A-201ENST00000363922 136 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AP002784.2-201ENST00000397300 549 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC092745.2-202ENST00000411880 369 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 PSMA2P3-201ENST00000429685 675 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 NEK4P1-201ENST00000433383 879 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 RPL21P112-201ENST00000434403 463 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 TXNP1-201ENST00000441872 371 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 RPS12P18-201ENST00000442381 270 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 RPS4XP13-201ENST00000483219 789 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC097462.2-201ENST00000504623 481 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 NAMPTP2-201ENST00000505629 1115 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AP003717.3-201ENST00000544832 1180 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AL389895.1-201ENST00000554127 252 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AL591516.1-201ENST00000611326 274 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 AL450489.1-201ENST00000612071 468 ntBASIC3.29□□□□□ -1.88
NXF3Q9H4D5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NXF3Q9H4D5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms