Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 AL031775.1-201ENST00000607014 887 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 AC107214.2-201ENST00000608204 634 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 MIR6867-201ENST00000610636 67 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 FAM27D1-201ENST00000612308 341 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPBQ9H078 AC099669.2-201ENST00000616549 437 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPBQ9H078 AC073968.1-201ENST00000618594 637 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 AL161637.1-201ENST00000622380 412 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 AC139792.2-201ENST00000624218 587 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 MIR6715B-201ENST00000637172 77 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 AC008013.2-202ENST00000637965 364 ntBASIC4.21□□□□□ -1.74
CLPBQ9H078 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CLPBQ9H078 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CLPBQ9H078 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
CLPBQ9H078 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CLPBQ9H078 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.21□□□□□ -1.74
CLPBQ9H078 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPBQ9H078 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 PNPT1P2-201ENST00000456768 2050 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPBQ9H078 MTND4P16-201ENST00000466108 1367 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 RNU4-24P-201ENST00000364565 139 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 RNU6-343P-201ENST00000364709 104 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 Y_RNA.318-201ENST00000365131 97 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 MIR153-1-201ENST00000384914 90 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 MIR513A2-201ENST00000385249 127 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 MTND4LP20-201ENST00000402379 270 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 MIR1250-201ENST00000408098 113 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 HMGB1P11-201ENST00000413899 637 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AL356095.1-201ENST00000417217 199 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC092647.1-201ENST00000420654 287 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 COX6B1P7-201ENST00000430845 235 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AL365184.2-201ENST00000431139 435 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 RPL7P28-201ENST00000437739 740 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 RPL23AP46-201ENST00000438548 490 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AL831737.1-201ENST00000441288 271 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 TRIM60P18-201ENST00000441518 828 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 HSPE1P28-201ENST00000443139 211 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 CDC27P1-201ENST00000445384 715 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 FAM172BP-201ENST00000487497 1089 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 POU5F1P7-201ENST00000508759 541 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC006499.6-201ENST00000511169 607 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 IGKV2D-36-201ENST00000518643 226 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.2□□□□□ -1.74
CLPBQ9H078 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 OR8R1P-201ENST00000543943 764 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 OR6C7P-201ENST00000547875 934 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPBQ9H078 GTF2IP22-201ENST00000554443 182 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 MIR1254-2-201ENST00000579553 63 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC112187.2-201ENST00000604345 283 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC064872.1-201ENST00000604823 1072 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC084782.3-201ENST00000612282 578 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.2□□□□□ -1.74
CLPBQ9H078 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
CLPBQ9H078 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.2□□□□□ -1.74
CLPBQ9H078 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CLPBQ9H078 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CLPBQ9H078 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CLPBQ9H078 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLPBQ9H078 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLPBQ9H078 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
CLPBQ9H078 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
CLPBQ9H078 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CLPBQ9H078 RN7SKP280-201ENST00000364196 304 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 RN7SKP33-201ENST00000410942 340 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 BTF3L4P1-201ENST00000413813 468 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.19□□□□□ -1.74
CLPBQ9H078 RPL31P45-201ENST00000419532 356 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 MTCYBP24-201ENST00000420387 1106 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.19□□□□□ -1.74
CLPBQ9H078 CYCSP46-201ENST00000423569 204 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AC005517.2-201ENST00000424673 553 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.19□□□□□ -1.74
CLPBQ9H078 HLA-N-201ENST00000437516 135 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.19□□□□□ -1.74
CLPBQ9H078 RPL23AP89-201ENST00000439324 255 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 COX6CP2-201ENST00000444980 225 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AL360221.1-201ENST00000445989 335 ntBASIC4.19□□□□□ -1.74
CLPBQ9H078 AL590399.6-201ENST00000446396 307 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms