Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 Y_RNA.304-201ENST00000365011 112 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 RNU6-1117P-201ENST00000384525 104 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 RN7SKP271-201ENST00000410528 320 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 RNA5SP155-201ENST00000411154 129 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC063979.1-201ENST00000415539 377 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC017079.2-201ENST00000416102 485 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL353621.1-201ENST00000418219 243 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL391219.1-201ENST00000422570 483 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 HMGB1P27-201ENST00000431429 603 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 PRDX3P3-201ENST00000447765 522 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 KF459542.1-201ENST00000450908 553 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 RN7SL382P-201ENST00000482631 282 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL390198.2-201ENST00000510553 222 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC022559.1-201ENST00000520905 205 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 SNRPCP6-201ENST00000528310 210 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC006077.1-201ENST00000604746 343 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC123912.5-201ENST00000605470 343 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 CENPF-206ENST00000614578 528 ntTSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC034229.6-201ENST00000623704 224 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC090740.1-201ENST00000623193 2262 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AC015799.1-201ENST00000622996 3122 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL355834.1-201ENST00000556602 3965 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 AL606537.1-201ENST00000607258 2011 ntBASIC5.96□□□□□ -1.46
USB1Q9BQ65 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.96□□□□□ -1.46
USB1Q9BQ65 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 RPL12P13-201ENST00000310055 497 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 RNU6-989P-201ENST00000362756 107 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC019155.1-201ENST00000382242 574 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 RNU6-47P-201ENST00000383866 107 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 RNU6-821P-201ENST00000390995 107 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 PIGFP3-201ENST00000441918 722 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 RPL21P104-201ENST00000464143 478 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 RPL23AP2-201ENST00000471227 466 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 OR9A1P-202ENST00000484361 945 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 MRPL42P6-201ENST00000486397 371 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 RN7SL187P-201ENST00000495587 303 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC095057.1-201ENST00000507583 168 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC090022.1-201ENST00000546569 311 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC022884.2-201ENST00000578535 580 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC091133.5-201ENST00000603088 301 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 MIR6503-201ENST00000622884 86 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC005514.1-201ENST00000623521 208 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC068213.1-201ENST00000625124 226 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
USB1Q9BQ65 SMG1P7-201ENST00000565246 2704 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 AC232271.1-201ENST00000602455 2715 ntBASIC5.95□□□□□ -1.46
USB1Q9BQ65 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USB1Q9BQ65 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USB1Q9BQ65 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms