Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 DIDO1-206ENST00000395340 7551 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ECM1P2-201ENST00000503354 1577 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU1-74P-201ENST00000384108 171 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR199B-201ENST00000384849 110 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 VN1R8P-201ENST00000407739 893 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU4ATAC2P-201ENST00000408674 126 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU6-712P-201ENST00000410558 100 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 GTF2IP5-201ENST00000414608 731 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 OR1AA1P-201ENST00000419597 916 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NANOGP6-201ENST00000429190 847 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TAAR7P-201ENST00000436141 242 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC009296.1-201ENST00000443146 155 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC02210-201ENST00000444561 288 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RPL7P48-201ENST00000461513 746 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RN7SL132P-201ENST00000478131 296 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC069528.1-202ENST00000482888 637 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU6-1146P-201ENST00000516282 102 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NDUFA5P2-201ENST00000519723 344 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SUB1P1-201ENST00000524415 382 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AP003034.1-201ENST00000534621 422 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC053481.4-201ENST00000583164 216 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MIR4769-201ENST00000584126 77 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TPMTP1-201ENST00000592307 737 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CDC42EP3P1-201ENST00000601004 764 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC105254.2-201ENST00000603636 436 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC021646.1-201ENST00000605469 484 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL451049.1-201ENST00000608672 497 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC063952.1-203ENST00000634410 658 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 GK5-201ENST00000392993 9837 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NHS-204ENST00000615422 8860 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 WDR7-213ENST00000615645 5257 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU6-1249P-201ENST00000363237 111 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU1-132P-201ENST00000364300 164 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU6-1131P-201ENST00000364955 107 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.326-201ENST00000365176 113 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 RNU6-128P-201ENST00000383976 107 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL009179.1-201ENST00000406085 265 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 NEFMP1-201ENST00000443423 1006 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SLC25A18P1-201ENST00000449385 454 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC104306.1-201ENST00000449702 371 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC009961.3-201ENST00000449832 765 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC027673.1-201ENST00000456245 405 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC084824.2-201ENST00000548906 345 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 EIF5A2P1-201ENST00000564027 460 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC002400.1-201ENST00000569310 726 ntBASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
HMCN1Q96RW7 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms