Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 PPIAP13-201ENST00000434706 478 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 BTF3P6-201ENST00000448054 499 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC233279.1-201ENST00000455300 423 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 ST13P14-201ENST00000474095 734 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC022447.3-201ENST00000506865 495 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC026402.1-201ENST00000513642 170 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 RN7SKP46-201ENST00000515942 234 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 HMGB1P19-201ENST00000517578 577 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 TRMT10BP1-201ENST00000519377 943 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AP000827.1-201ENST00000527814 258 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 CYCSP29-201ENST00000533731 318 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 ARF4P1-201ENST00000605447 541 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC093788.1-201ENST00000609356 927 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC022106.2-201ENST00000620114 757 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 AC068880.5-201ENST00000624331 290 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 MTND5P1-201ENST00000445440 1375 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CHFRQ96EP1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHFRQ96EP1 AL136164.3-201ENST00000624429 3978 ntBASIC4.72□□□□□ -1.65
CHFRQ96EP1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.71□□□□□ -1.65
CHFRQ96EP1 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHFRQ96EP1 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHFRQ96EP1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
CHFRQ96EP1 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL031119.1-201ENST00000404707 1879 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHFRQ96EP1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 SNORA51.2-201ENST00000364595 132 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNU5E-5P-201ENST00000365379 116 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNA5SP88-201ENST00000365560 109 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 UBBP2-201ENST00000376781 231 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNU4-31P-201ENST00000384211 141 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNU6-878P-201ENST00000384578 110 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNU6-244P-201ENST00000391028 104 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 Z98745.1-201ENST00000402553 494 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 TMSB10P2-201ENST00000416049 131 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 MTND3P17-201ENST00000416968 344 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 ZNF90P2-204ENST00000419323 1075 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RAD23BP1-201ENST00000421404 1227 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL389915.1-201ENST00000422463 466 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AP001324.1-201ENST00000428553 399 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 MTCO1P54-201ENST00000430139 712 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 RPL23AP93-201ENST00000440847 484 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHFRQ96EP1 CYCSP34-201ENST00000458172 304 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 NDUFB4P2-201ENST00000509515 391 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC015795.1-201ENST00000513669 327 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 RN7SKP31-201ENST00000516354 278 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AP005597.4-201ENST00000526762 229 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 DEFB109D-201ENST00000529497 240 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC087276.1-201ENST00000529659 480 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC007424.1-203ENST00000554613 687 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 ATP5F1P7-201ENST00000567330 760 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC025678.1-201ENST00000567861 338 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC124303.1-201ENST00000605703 360 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL355802.3-201ENST00000607571 545 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AL445567.2-201ENST00000618935 498 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 AC067931.1-201ENST00000624190 671 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 CRYM-AS1-204ENST00000637983 556 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 MTND5P3-201ENST00000438536 1800 ntBASIC4.71□□□□□ -1.66
CHFRQ96EP1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CHFRQ96EP1 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms