Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.32□□□□□ -1.4
HLA-CQ95604 NCOA4P3-201ENST00000513203 1877 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HLA-CQ95604 AC025809.2-201ENST00000625085 1802 ntBASIC6.32□□□□□ -1.4
HLA-CQ95604 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 SPATA31C1-201ENST00000420021 3895 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 AL033543.1-201ENST00000623440 13454 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-CQ95604 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AL121886.1-201ENST00000358609 435 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 SNORA43.1-201ENST00000364863 140 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AC009804.1-201ENST00000400949 179 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AL139039.1-201ENST00000401900 692 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AL590704.1-201ENST00000402856 794 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RN7SKP213-201ENST00000410746 298 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RNU2-25P-201ENST00000411041 191 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RNU2-14P-201ENST00000411053 191 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RPL36P18-201ENST00000419316 318 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AL390119.1-201ENST00000440329 312 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AC234775.1-201ENST00000454247 670 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AC007967.1-201ENST00000455422 1159 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AC010631.1-201ENST00000474150 156 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AC018437.1-201ENST00000492214 406 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RNU6-615P-201ENST00000516065 106 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 RN7SKP66-201ENST00000516681 231 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-CQ95604 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.31□□□□□ -1.4
HLA-CQ95604 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 MIR4273-201ENST00000582824 84 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AC002044.1-201ENST00000606707 158 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 DLEU2_2.2-201ENST00000615474 90 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 MIR6810-201ENST00000622701 70 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 AP000550.3-201ENST00000637734 379 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
HLA-CQ95604 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HLA-CQ95604 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
HLA-CQ95604 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 AC023421.1-201ENST00000590535 1785 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
HLA-CQ95604 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
HLA-CQ95604 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 ZNF72P-201ENST00000425869 1908 ntBASIC6.31□□□□□ -1.4
HLA-CQ95604 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
HLA-CQ95604 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 PARP4P2-201ENST00000446672 3326 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-CQ95604 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
HLA-CQ95604 AC022819.1-201ENST00000563495 3910 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.3□□□□□ -1.4
HLA-CQ95604 AC027287.1-201ENST00000553115 1453 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-CQ95604 AC068870.1-201ENST00000563737 2455 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-CQ95604 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
HLA-CQ95604 Y_RNA.471-201ENST00000384312 102 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AC005042.1-201ENST00000393397 800 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AL645733.1-201ENST00000402250 217 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 RNU6-1203P-201ENST00000410703 110 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AC096921.1-201ENST00000411661 375 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AP000275.1-201ENST00000411943 390 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 HMGA1P8-201ENST00000414130 321 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 EI24P4-201ENST00000423683 1078 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AC092647.2-201ENST00000452998 253 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 RPSAP50-201ENST00000481955 852 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 RPL7P23-201ENST00000493874 747 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 RPS23P5-201ENST00000495419 428 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 RPS4XP20-201ENST00000505751 772 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.3□□□□□ -1.4
HLA-CQ95604 RNU6-397P-201ENST00000516226 104 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 Y_RNA.687-201ENST00000516558 91 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.3□□□□□ -1.4
HLA-CQ95604 IGLV3-6-201ENST00000523937 250 ntBASIC6.3□□□□□ -1.4
HLA-CQ95604 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 194.9 ms