Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 MTND4LP10-201ENST00000435146 291 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RPS3AP54-201ENST00000435535 734 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC006466.1-201ENST00000438721 289 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 MTND4P25-201ENST00000441039 533 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.09□□□□□ -1.59
ERCC4Q92889 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 ARL4AP2-201ENST00000507378 601 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC010342.1-201ENST00000514047 877 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RNU2-46P-201ENST00000517038 113 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AP001893.2-201ENST00000526949 202 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.09□□□□□ -1.59
ERCC4Q92889 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.09□□□□□ -1.59
ERCC4Q92889 MTND6P33-201ENST00000571794 183 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 MIR3682-201ENST00000581338 84 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 TPMTP1-201ENST00000592307 737 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 LARP7P1-201ENST00000605576 316 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.09□□□□□ -1.59
ERCC4Q92889 MLECP1-201ENST00000615893 709 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
ERCC4Q92889 RNU6-156P-201ENST00000621869 107 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC091905.2-201ENST00000623143 306 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC068880.5-201ENST00000624331 290 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 U3.53-201ENST00000628922 216 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.09□□□□□ -1.59
ERCC4Q92889 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.6
ERCC4Q92889 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
ERCC4Q92889 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.09□□□□□ -1.6
ERCC4Q92889 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
ERCC4Q92889 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.08□□□□□ -1.6
ERCC4Q92889 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC4Q92889 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC4Q92889 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC139769.1-204ENST00000472297 1931 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 CCNG1P1-201ENST00000406783 885 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 CCDC58P2-201ENST00000417131 366 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AL109913.1-201ENST00000421173 514 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC069157.1-201ENST00000421749 137 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AL662791.1-201ENST00000441992 928 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC011753.3-201ENST00000443436 406 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AP000542.1-201ENST00000448473 371 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC023598.1-201ENST00000472521 361 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC083982.1-201ENST00000485679 344 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.08□□□□□ -1.6
ERCC4Q92889 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 OR5AQ1P-201ENST00000527596 927 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.08□□□□□ -1.6
ERCC4Q92889 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.08□□□□□ -1.6
ERCC4Q92889 HMGN1P30-201ENST00000589286 268 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.08□□□□□ -1.6
ERCC4Q92889 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.08□□□□□ -1.6
ERCC4Q92889 AL359999.1-201ENST00000604513 294 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC080013.4-201ENST00000607624 649 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 FAM25E-202ENST00000608562 189 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC012409.3-201ENST00000611343 981 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC4Q92889 AC006338.1-201ENST00000618453 749 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC068722.2-201ENST00000618734 544 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 MIR7154-201ENST00000620673 73 ntBASIC5.08□□□□□ -1.6
ERCC4Q92889 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ERCC4Q92889 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
ERCC4Q92889 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.08□□□□□ -1.6
ERCC4Q92889 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ERCC4Q92889 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC4Q92889 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ERCC4Q92889 ZFRP1-201ENST00000457579 2970 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 MAPK10-263ENST00000641052 4307 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ERCC4Q92889 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ERCC4Q92889 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC5.07□□□□□ -1.6
ERCC4Q92889 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
ERCC4Q92889 AC067945.1-201ENST00000342609 618 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AL590002.1-201ENST00000406554 418 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AL023807.1-201ENST00000407932 359 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RN7SKP216-201ENST00000411050 312 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RN7SKP100-201ENST00000411258 284 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.07□□□□□ -1.6
ERCC4Q92889 AC096632.1-201ENST00000427395 310 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.07□□□□□ -1.6
ERCC4Q92889 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC5.07□□□□□ -1.6
ERCC4Q92889 RPL23AP74-201ENST00000437246 471 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RPL23AP93-201ENST00000440847 484 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 AL512326.1-201ENST00000443050 721 ntBASIC5.07□□□□□ -1.6
ERCC4Q92889 RPS4XP4-201ENST00000443195 763 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms