Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL133457.1-201ENST00000564251 987 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 MIR4666A-201ENST00000580160 79 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC124312.5-201ENST00000604451 268 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC116312.1-201ENST00000606841 314 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC008121.3-201ENST00000618726 433 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC069209.1-201ENST00000619282 651 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 AC073348.1-201ENST00000623002 331 ntBASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.09□□□□□ -1.59
SH3RF3Q8TEJ3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
SH3RF3Q8TEJ3 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.09□□□□□ -1.6
SH3RF3Q8TEJ3 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.09□□□□□ -1.6
SH3RF3Q8TEJ3 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
SH3RF3Q8TEJ3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-501P-201ENST00000364072 100 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RNA5SP130-201ENST00000364431 114 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RNA5SP283-201ENST00000365604 119 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-452P-201ENST00000384406 107 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 SNORD66.1-201ENST00000391230 76 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AL078604.1-201ENST00000404609 466 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RNU6-603P-201ENST00000411403 107 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC004987.3-201ENST00000413879 771 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 LINC01347-201ENST00000417964 355 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AIMP1P1-201ENST00000418670 937 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RPL31P54-201ENST00000429803 370 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RPS24P8-201ENST00000431490 402 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC092170.1-201ENST00000440211 356 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 HSFY6P-201ENST00000445573 403 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 HMGB1P16-201ENST00000447155 540 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RPL39P6-201ENST00000448289 150 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC022364.2-201ENST00000457963 554 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 RPL7P48-201ENST00000461513 746 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 LARP1BP2-201ENST00000486594 519 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AF213884.1-201ENST00000488102 463 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC005912.1-201ENST00000495392 255 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 MTCO1P30-201ENST00000515244 580 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AP001893.2-201ENST00000526949 202 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AP002748.2-201ENST00000528671 348 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AL157687.1-201ENST00000554853 619 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 PCMTD1P2-201ENST00000565017 355 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC106785.1-201ENST00000565935 262 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC024023.1-201ENST00000624530 922 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC090971.4-201ENST00000560291 1800 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 AC093535.2-201ENST00000624769 2326 ntBASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF3Q8TEJ3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 AL592182.3-201ENST00000642132 3304 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 Y_RNA.132-201ENST00000363421 102 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 Y_RNA.138-201ENST00000363462 102 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 Y_RNA.419-201ENST00000384041 102 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 Y_RNA.573-201ENST00000384763 105 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 SNORD65.1-201ENST00000390889 71 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 SNORA40.3-201ENST00000390964 122 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 MTCYBP36-201ENST00000404146 440 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 RPL17P12-201ENST00000413391 526 ntBASIC5.07□□□□□ -1.6
SH3RF3Q8TEJ3 RPS3AP9-201ENST00000417027 792 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms