Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RPS27P5-201ENST00000444247 244 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 HMGB1P48-201ENST00000446155 598 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.57□□□□□ -2
FNDC9Q8TBE3 NIPA2P5-201ENST00000452282 464 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 NF1P3-201ENST00000457709 450 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC104689.1-201ENST00000473356 768 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.57□□□□□ -2
FNDC9Q8TBE3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC026801.2-201ENST00000515352 425 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 HIGD1AP3-201ENST00000515857 278 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 SNORA31.13-201ENST00000516624 135 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 SCARNA13-201ENST00000516672 275 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 RN7SKP283-201ENST00000517197 270 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 NOP56P3-201ENST00000549457 385 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC090616.5-202ENST00000582111 297 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC024153.1-201ENST00000603103 365 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AL133393.1-201ENST00000603277 287 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.57□□□□□ -2
FNDC9Q8TBE3 AL359535.1-201ENST00000612100 1087 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 AC022509.4-201ENST00000621404 572 ntBASIC2.57□□□□□ -2
FNDC9Q8TBE3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
FNDC9Q8TBE3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.57□□□□□ -2
FNDC9Q8TBE3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
FNDC9Q8TBE3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FNDC9Q8TBE3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.56□□□□□ -2
FNDC9Q8TBE3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 LINC01347-201ENST00000417964 355 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 RPL21P40-201ENST00000428586 483 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 UBE2V2P3-201ENST00000433562 437 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC093156.1-201ENST00000440382 670 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 OR52A4P-203ENST00000498233 1014 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC108157.1-201ENST00000510511 539 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC091826.1-201ENST00000514065 313 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 RNA5SP367-201ENST00000516557 118 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC010306.1-201ENST00000523223 1117 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC083760.1-201ENST00000589621 670 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC078899.3-201ENST00000599065 212 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 YWHAQP7-201ENST00000603536 658 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC069234.5-201ENST00000611056 416 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
FNDC9Q8TBE3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.56□□□□□ -2
FNDC9Q8TBE3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.56□□□□□ -2
FNDC9Q8TBE3 AL035425.3-201ENST00000564206 4996 ntBASIC2.56□□□□□ -2
FNDC9Q8TBE3 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FNDC9Q8TBE3 SNORA27.3-201ENST00000364937 134 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.55□□□□□ -2
FNDC9Q8TBE3 BTBD10P2-201ENST00000404779 676 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC023128.2-201ENST00000420880 1223 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 AL355994.1-201ENST00000424379 260 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.55□□□□□ -2
FNDC9Q8TBE3 YWHAZP7-201ENST00000436906 631 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 RPS24P13-201ENST00000442520 397 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 AL590399.6-201ENST00000446396 307 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 RPL23AP11-201ENST00000475260 469 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC098799.1-201ENST00000504752 800 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 RNU6-760P-201ENST00000516078 97 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC139103.1-201ENST00000534696 1030 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC034268.2-201ENST00000571784 482 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC006504.3-201ENST00000586818 523 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.55□□□□□ -2
FNDC9Q8TBE3 NTAN1P1-201ENST00000603150 646 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AL590240.3-201ENST00000621416 943 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 AC007342.9-201ENST00000623877 1385 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.55□□□□□ -2
FNDC9Q8TBE3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms