Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AL355379.1-201ENST00000405542 640 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 AC080125.1-201ENST00000414888 684 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 Z98742.3-201ENST00000418637 326 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL9Q8NET4 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 HAUS1P1-201ENST00000505275 832 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 AC022790.1-201ENST00000522872 204 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 OR5AK3P-201ENST00000527486 1297 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 AC010928.3-201ENST00000587712 541 ntBASIC3.14□□□□□ -1.91
RTL9Q8NET4 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL9Q8NET4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RTL9Q8NET4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RTL9Q8NET4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTL9Q8NET4 MIR504-201ENST00000385065 83 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 MRPL50P4-201ENST00000446432 475 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 RPL23AP23-201ENST00000452590 471 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 OR6K1P-201ENST00000456766 971 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC126182.1-201ENST00000478134 357 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC103975.1-201ENST00000482506 483 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AP000873.5-201ENST00000533906 236 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC034268.2-201ENST00000571784 482 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC098826.3-201ENST00000603823 466 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC018754.1-201ENST00000607486 925 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 FAM35CP-201ENST00000554755 2470 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RTL9Q8NET4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTL9Q8NET4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
RTL9Q8NET4 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RTL9Q8NET4 AC006020.1-201ENST00000420179 1854 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 XPOTP1-201ENST00000443317 2398 ntBASIC3.13□□□□□ -1.91
RTL9Q8NET4 AL359511.1-201ENST00000402970 211 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RNU4-53P-201ENST00000410828 140 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RPS20P25-201ENST00000412447 352 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC098592.2-201ENST00000413158 265 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC003685.2-201ENST00000422795 395 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 BX276092.3-201ENST00000424182 230 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC093151.1-201ENST00000427711 313 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 HSPE1P28-201ENST00000443139 211 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AL163153.1-201ENST00000554223 283 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 VN1R78P-201ENST00000597393 564 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 FRG1DP-201ENST00000635586 771 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 API5P2-201ENST00000397055 1498 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AL353746.1-201ENST00000566293 6881 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RTL9Q8NET4 MIR592-201ENST00000384959 97 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 HMGB1P10-201ENST00000395823 563 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RN7SKP223-201ENST00000410582 62 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 USP9YP20-201ENST00000419224 558 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 FCF1P1-201ENST00000432690 571 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RPL21P18-201ENST00000469899 480 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 RN7SL297P-201ENST00000483161 293 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 ATG10-AS1-201ENST00000504846 648 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 MIR4524B-201ENST00000581569 115 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 MAGOH2P-202ENST00000584384 429 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.12□□□□□ -1.91
RTL9Q8NET4 BDH2P1-201ENST00000602288 736 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC015849.6-201ENST00000605454 474 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 AC068722.2-201ENST00000618734 544 ntBASIC3.12□□□□□ -1.91
RTL9Q8NET4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 SNORD114-30-201ENST00000364448 72 ntBASIC3.11□□□□□ -1.91
RTL9Q8NET4 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 RN7SKP192-201ENST00000411291 327 ntBASIC3.11□□□□□ -1.91
RTL9Q8NET4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 RPL30P3-201ENST00000424262 333 ntBASIC3.11□□□□□ -1.91
RTL9Q8NET4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
RTL9Q8NET4 SETP8-201ENST00000435341 628 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms