Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC117529.2-201ENST00000512159 2068 ntBASIC2.65□□□□□ -1.99
ZIC4Q8N9L1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ZIC4Q8N9L1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
ZIC4Q8N9L1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 ZNF734P-201ENST00000419494 1534 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RNU6-374P-201ENST00000364146 108 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL138885.1-201ENST00000405921 675 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RPS3AP9-201ENST00000417027 792 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC073310.1-201ENST00000423226 1033 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC093422.3-201ENST00000428506 305 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 HMGN2P20-201ENST00000437531 273 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 MTND3P4-201ENST00000453537 303 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 MTND2P6-201ENST00000455337 1030 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 snoU13.3-201ENST00000459441 104 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RN7SL75P-201ENST00000461926 281 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RPS27AP1-201ENST00000475545 471 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC068724.1-201ENST00000487100 792 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RN7SL633P-201ENST00000488974 297 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL024509.2-201ENST00000493462 493 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 PRELID3BP6-201ENST00000503839 571 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RNU6-202P-201ENST00000515998 96 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RN7SKP43-201ENST00000516173 320 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 RN7SKP272-201ENST00000516988 232 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 OR5G4P-201ENST00000525251 760 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AP003385.6-201ENST00000531603 374 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC113368.1-201ENST00000603736 382 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AP001033.2-201ENST00000609701 1003 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 MIR1264-201ENST00000616374 69 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 ATP5A1P2-202ENST00000616464 443 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AC006963.1-201ENST00000624003 1052 ntBASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.64□□□□□ -1.99
ZIC4Q8N9L1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AL353743.1-202ENST00000431724 1695 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC093831.2-201ENST00000624393 3427 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC002546.1-201ENST00000588041 2504 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RNU6-50P-201ENST00000362356 103 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RNU6-761P-201ENST00000384148 107 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SNORA48.5-201ENST00000391143 135 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SNORA11.1-201ENST00000408133 129 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RNA5SP129-201ENST00000410276 118 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 DPPA2P1-201ENST00000428060 556 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC244505.4-201ENST00000434905 287 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SSXP5-201ENST00000443473 287 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 MTND1P33-201ENST00000446251 917 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RPL37P4-201ENST00000448908 268 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 NPM1P13-201ENST00000452663 865 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RPS24P6-201ENST00000452670 400 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 DNAJC19P8-201ENST00000452887 259 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC104057.1-201ENST00000515547 497 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RNU6-751P-201ENST00000516382 101 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 IGKV2D-36-201ENST00000518643 226 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 RPL12P22-201ENST00000519073 490 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 ATP5F1P7-201ENST00000567330 760 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 MTATP6P25-201ENST00000574491 261 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 KATNBL1P1-201ENST00000605192 748 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 FRG1HP-204ENST00000617940 757 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC020923.1-201ENST00000624021 917 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AL356118.1-201ENST00000635272 1078 ntBASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.63□□□□□ -1.99
ZIC4Q8N9L1 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms