Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RNU6-619P-201ENST00000365146 108 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RNU6-207P-201ENST00000384137 107 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 MCTS2P-201ENST00000394552 546 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL138880.1-201ENST00000405824 642 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RNU6-575P-201ENST00000411326 105 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC092638.1-201ENST00000411966 1275 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 HMGN1P24-201ENST00000412282 298 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC069157.1-201ENST00000421749 137 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL390023.1-201ENST00000428836 262 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RPL21P112-201ENST00000434403 463 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 HMGB1P12-201ENST00000438594 598 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RPL21P2-201ENST00000440049 481 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 CYCSP35-201ENST00000451978 304 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 HMGN2P16-201ENST00000456802 261 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 ARPC3P2-201ENST00000457786 533 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RPL21P13-201ENST00000488305 481 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 NAMPTP2-201ENST00000505629 1115 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 MTCYBP41-201ENST00000528913 1123 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 OR4R2P-201ENST00000530815 597 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC011611.1-201ENST00000552179 197 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL157394.1-201ENST00000562983 1224 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 SNORD39.3-201ENST00000584451 71 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 RPL21P136-201ENST00000605378 396 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL451074.6-201ENST00000608512 729 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 uc_338.25-201ENST00000613756 156 ntBASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC50Q8IVM0 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.34□□□□□ -1.88
CCDC50Q8IVM0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
CCDC50Q8IVM0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 MT-TC-201ENST00000387405 66 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 OFD1P18Y-201ENST00000420889 959 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC233981.1-201ENST00000423224 461 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 ARL4AP4-201ENST00000434170 518 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC002542.1-201ENST00000440683 193 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 HMGB3P6-201ENST00000444896 598 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC104073.1-201ENST00000451988 151 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 SYPL1P1-201ENST00000473622 768 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 RPS27AP1-201ENST00000475545 471 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 RN7SL499P-201ENST00000481141 276 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 SNORA31.26-201ENST00000517250 137 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AP000790.1-201ENST00000528891 737 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC113368.1-201ENST00000603736 382 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC105227.2-201ENST00000615075 605 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 U73479.1-201ENST00000618062 168 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 AL161912.2-201ENST00000565707 3007 ntBASIC3.33□□□□□ -1.88
CCDC50Q8IVM0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RNU6-989P-201ENST00000362756 107 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 RNU6-335P-201ENST00000364563 113 ntBASIC3.32□□□□□ -1.88
CCDC50Q8IVM0 MIR649-201ENST00000384843 97 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms