Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP48Q86UV5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.81□□□□□ -1.48
USP48Q86UV5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.81□□□□□ -1.48
USP48Q86UV5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
USP48Q86UV5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
USP48Q86UV5 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 NUP58P1-201ENST00000502546 1738 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AL672167.1-205ENST00000641112 3080 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP48Q86UV5 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
USP48Q86UV5 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 RNA5SP258-201ENST00000362750 119 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 Y_RNA.234-201ENST00000364409 97 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 RNU6-1207P-201ENST00000384343 107 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 Y_RNA.573-201ENST00000384763 105 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 TBCAP2-201ENST00000416175 326 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 RPL30P3-201ENST00000424262 333 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AC112653.1-201ENST00000443851 386 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AL589765.3-201ENST00000446084 462 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 TPT1P14-201ENST00000448018 505 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 RPL38P1-201ENST00000460914 211 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 RPS17P2-201ENST00000461663 408 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC022034.3-201ENST00000471393 478 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 RPL35P6-201ENST00000490024 372 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.8□□□□□ -1.48
USP48Q86UV5 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AC098799.2-201ENST00000509466 868 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 NPM1P41-201ENST00000512920 831 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 Vault.3-201ENST00000516676 95 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 IGLVIV-53-201ENST00000520107 367 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AP001646.1-201ENST00000527936 915 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AL157687.1-201ENST00000554853 619 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC106785.1-201ENST00000565935 262 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AC022726.1-201ENST00000587475 207 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 VN1R85P-201ENST00000601587 426 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC007363.1-201ENST00000604736 620 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AL365503.1-201ENST00000605247 905 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 MIR98-201ENST00000606724 119 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 AC091905.1-201ENST00000624400 311 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 AC008785.1-201ENST00000624475 456 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 LRRC77P-213ENST00000637727 880 ntBASIC5.8□□□□□ -1.48
USP48Q86UV5 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.8□□□□□ -1.48
USP48Q86UV5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.8□□□□□ -1.48
USP48Q86UV5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
USP48Q86UV5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.79□□□□□ -1.48
USP48Q86UV5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.79□□□□□ -1.48
USP48Q86UV5 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
USP48Q86UV5 AC093535.2-201ENST00000624769 2326 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 RNU6-97P-201ENST00000363387 104 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 SNORA72.1-201ENST00000363485 129 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 RNA5SP509-201ENST00000364577 119 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 RNU6-114P-201ENST00000384704 105 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 SNORA68.2-201ENST00000391263 128 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 ENSAP1-201ENST00000392855 326 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.79□□□□□ -1.48
USP48Q86UV5 TRIM60P10Y-201ENST00000425589 751 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 MTCO2P11-201ENST00000431069 680 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC104850.1-201ENST00000435940 476 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.79□□□□□ -1.48
USP48Q86UV5 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.79□□□□□ -1.48
USP48Q86UV5 AL031584.1-201ENST00000447169 754 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 AL136380.1-201ENST00000447970 162 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 MTND5P20-201ENST00000448677 143 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 MTND1P12-201ENST00000455231 147 ntBASIC5.79□□□□□ -1.48
USP48Q86UV5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms