Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 RNU6-55P-201ENST00000411092 107 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 RN7SKP192-201ENST00000411291 327 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 RNU6-954P-201ENST00000411355 107 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 AC012498.1-201ENST00000424037 437 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
USP50Q70EL3 ELOCP11-201ENST00000436690 332 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 ISCA1P2-201ENST00000438679 421 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 MED6P1-201ENST00000439659 713 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 ELOCP16-201ENST00000444494 332 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.35□□□□□ -1.87
USP50Q70EL3 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.35□□□□□ -1.87
USP50Q70EL3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.35□□□□□ -1.87
USP50Q70EL3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.35□□□□□ -1.87
USP50Q70EL3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.35□□□□□ -1.87
USP50Q70EL3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
USP50Q70EL3 AC096725.1-201ENST00000514266 313 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.35□□□□□ -1.87
USP50Q70EL3 MTND4LP24-201ENST00000572277 291 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.35□□□□□ -1.87
USP50Q70EL3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.35□□□□□ -1.87
USP50Q70EL3 AL451074.6-201ENST00000608512 729 ntBASIC3.35□□□□□ -1.87
USP50Q70EL3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP50Q70EL3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.35□□□□□ -1.87
USP50Q70EL3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.34□□□□□ -1.87
USP50Q70EL3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
USP50Q70EL3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP50Q70EL3 DUTP6-201ENST00000425573 462 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 AL031736.2-201ENST00000426573 787 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.34□□□□□ -1.87
USP50Q70EL3 MRPS33P4-201ENST00000434892 317 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 RPL23AP15-201ENST00000450202 459 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 ARPC3P2-201ENST00000457786 533 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
USP50Q70EL3 SNORA31.21-201ENST00000517180 77 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.34□□□□□ -1.87
USP50Q70EL3 AP003122.3-201ENST00000526316 255 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.34□□□□□ -1.87
USP50Q70EL3 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 AC115085.1-201ENST00000588924 229 ntBASIC3.34□□□□□ -1.87
USP50Q70EL3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.34□□□□□ -1.87
USP50Q70EL3 MTND4P34-201ENST00000572715 1371 ntBASIC3.34□□□□□ -1.88
USP50Q70EL3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
USP50Q70EL3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
USP50Q70EL3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.88
USP50Q70EL3 MTND5P24-201ENST00000438892 1767 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP50Q70EL3 SNORA70E-201ENST00000384492 135 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.33□□□□□ -1.88
USP50Q70EL3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AL606490.7-201ENST00000433136 191 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 HMGN1P18-201ENST00000457642 277 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.33□□□□□ -1.88
USP50Q70EL3 RNA5SP217-201ENST00000515959 91 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 FAM60DP-201ENST00000524174 632 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.33□□□□□ -1.88
USP50Q70EL3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.33□□□□□ -1.88
USP50Q70EL3 TRAV11-201ENST00000539512 339 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.33□□□□□ -1.88
USP50Q70EL3 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
USP50Q70EL3 AC107905.1-201ENST00000616204 426 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AC022509.4-201ENST00000621404 572 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AC103798.2-201ENST00000624292 632 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.33□□□□□ -1.88
USP50Q70EL3 MIR7153-201ENST00000637758 57 ntBASIC3.33□□□□□ -1.88
USP50Q70EL3 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.33□□□□□ -1.88
USP50Q70EL3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USP50Q70EL3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.32□□□□□ -1.88
USP50Q70EL3 AP006437.1-201ENST00000641440 3685 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP50Q70EL3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP50Q70EL3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USP50Q70EL3 MIR592-201ENST00000384959 97 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 SAR1AP2-201ENST00000392696 594 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 ATF1P1-201ENST00000406040 927 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 RNU6-564P-201ENST00000410983 104 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.32□□□□□ -1.88
USP50Q70EL3 AC004987.3-201ENST00000413879 771 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.32□□□□□ -1.88
USP50Q70EL3 HSPE1P28-201ENST00000443139 211 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.32□□□□□ -1.88
USP50Q70EL3 snoU13.23-201ENST00000458863 104 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.32□□□□□ -1.88
USP50Q70EL3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.32□□□□□ -1.88
USP50Q70EL3 RN7SKP234-201ENST00000517173 224 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 RNA5SP380-201ENST00000517190 98 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.32□□□□□ -1.88
USP50Q70EL3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.32□□□□□ -1.88
USP50Q70EL3 OR4V1P-201ENST00000525394 1140 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 SYF2P1-201ENST00000550658 413 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.32□□□□□ -1.88
USP50Q70EL3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.32□□□□□ -1.88
USP50Q70EL3 AC025034.2-201ENST00000623264 286 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.32□□□□□ -1.88
USP50Q70EL3 CTSLP2-204ENST00000629029 392 ntBASIC3.32□□□□□ -1.88
USP50Q70EL3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USP50Q70EL3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USP50Q70EL3 AL355578.1-201ENST00000607405 1328 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms