Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC011753.1-201ENST00000451001 220 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 MIR3605-201ENST00000583214 100 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 snoU13.31-201ENST00000607291 104 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 MFSD8-245ENST00000641743 948 ntBASIC1.87□□□□□ -2.11
VPS13CQ709C8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.87□□□□□ -2.11
VPS13CQ709C8 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
VPS13CQ709C8 AL139276.1-201ENST00000311910 1001 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13CQ709C8 SNORA25.6-201ENST00000364121 118 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 RPS7P9-201ENST00000414704 586 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AL158825.1-201ENST00000414735 521 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC087385.1-201ENST00000475062 312 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 MIR2114-201ENST00000516645 80 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13CQ709C8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC013410.1-201ENST00000436223 1232 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 TVP23BP2-201ENST00000455082 615 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 RN7SKP96-201ENST00000516948 297 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 RNA5SP380-201ENST00000517190 98 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 ARL2BPP2-201ENST00000550907 489 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC110994.2-201ENST00000635481 492 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13CQ709C8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AL136964.1-201ENST00000622038 2990 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 SNORA67.3-201ENST00000384366 140 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 FAT1P1-201ENST00000406588 507 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC098826.1-201ENST00000433943 471 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AL451074.3-201ENST00000437709 472 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 AC012182.1-201ENST00000570133 895 ntBASIC1.86□□□□□ -2.11
VPS13CQ709C8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VPS13CQ709C8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13CQ709C8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13CQ709C8 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 GCNT6-201ENST00000379591 934 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AL138878.1-201ENST00000405131 347 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VPS13CQ709C8 RNU2-17P-201ENST00000410290 190 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AL121877.1-201ENST00000453704 622 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC068305.1-201ENST00000497406 726 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC021146.5-201ENST00000503544 545 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 MIR6733-201ENST00000635723 61 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC016717.2-201ENST00000609089 5141 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC004925.1-201ENST00000624256 2706 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC092427.1-202ENST00000430569 476 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 PPIAP17-201ENST00000438507 471 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 DNAJC19P4-201ENST00000440115 345 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 AC107398.1-201ENST00000486904 505 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 MUC2-202ENST00000613187 4845 ntBASIC1.85□□□□□ -2.11
VPS13CQ709C8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.85□□□□□ -2.11
VPS13CQ709C8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 AL162578.1-201ENST00000406202 378 ntBASIC1.84□□□□□ -2.11
VPS13CQ709C8 RN7SL283P-201ENST00000489055 303 ntBASIC1.84□□□□□ -2.11
VPS13CQ709C8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
VPS13CQ709C8 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 RNY1P10-201ENST00000363268 113 ntBASIC1.84□□□□□ -2.11
VPS13CQ709C8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 SCN1A-220ENST00000641603 12506 ntBASIC1.84□□□□□ -2.11
VPS13CQ709C8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.84□□□□□ -2.11
VPS13CQ709C8 MIR378A-201ENST00000362177 66 ntBASIC1.84□□□□□ -2.12
VPS13CQ709C8 RNU6-392P-201ENST00000364926 101 ntBASIC1.84□□□□□ -2.12
VPS13CQ709C8 HMGB3P8-201ENST00000449709 577 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms