| CRTC3 | Q6UUV7 | AC079684.1-201 | ENST00000621405 | 437 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC099494.2-201 | ENST00000623371 | 978 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPS4Y2-201 | ENST00000629237 | 792 nt | APPRIS P1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ASNSP3-201 | ENST00000451989 | 1306 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC104260.2-201 | ENST00000623551 | 3497 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC004972.1-201 | ENST00000623934 | 2209 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ZNF573-208 | ENST00000536220 | 2257 nt | APPRIS P1 TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ATRX-202 | ENST00000395603 | 10218 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | NPFFR2-203 | ENST00000358749 | 1559 nt | APPRIS P1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ARHGAP5-206 | ENST00000539826 | 4881 nt | APPRIS P3 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | HERC4-205 | ENST00000412272 | 4211 nt | TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MYBPC1-205 | ENST00000536007 | 3512 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MYBPC1-206 | ENST00000541119 | 3533 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | NBPF14-206 | ENST00000614999 | 10080 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC093775.1-201 | ENST00000624154 | 1868 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ZNF117-201 | ENST00000282869 | 9080 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | PCDH9-203 | ENST00000456367 | 5072 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | Y_RNA.100-201 | ENST00000363141 | 102 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR1L6-202 | ENST00000373684 | 1044 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MIR765-201 | ENST00000390226 | 114 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SNORD37.1-201 | ENST00000390968 | 65 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SNORA11B-201 | ENST00000408175 | 129 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RNU2-62P-201 | ENST00000410868 | 191 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MTCYBP8-201 | ENST00000422855 | 651 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | LINC00368-201 | ENST00000422994 | 650 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR4F13P-201 | ENST00000428478 | 931 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR4K11P-201 | ENST00000431829 | 904 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL355357.1-201 | ENST00000433531 | 417 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ERLEC1P1-201 | ENST00000433806 | 578 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL161722.2-201 | ENST00000434731 | 981 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL138799.3-201 | ENST00000438968 | 350 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC091685.1-201 | ENST00000442436 | 448 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC009487.1-201 | ENST00000444164 | 403 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL133260.2-201 | ENST00000445833 | 396 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC009987.1-201 | ENST00000446888 | 806 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC090804.1-201 | ENST00000448870 | 490 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC092647.2-201 | ENST00000452998 | 253 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC007547.1-201 | ENST00000462177 | 490 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC006512.1-201 | ENST00000468816 | 291 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPL5P22-201 | ENST00000480199 | 884 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RN7SL814P-201 | ENST00000487715 | 300 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RN7SKP116-201 | ENST00000516902 | 319 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC011979.2-201 | ENST00000527568 | 352 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC103798.1-201 | ENST00000532562 | 376 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC090023.2-201 | ENST00000540875 | 545 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | HMGN2P6-201 | ENST00000551091 | 273 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR11H7-201 | ENST00000553765 | 945 nt | APPRIS P1 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPL21P12-201 | ENST00000559810 | 515 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC040958.1-201 | ENST00000561102 | 201 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC093515.1-201 | ENST00000567103 | 445 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AP005059.2-201 | ENST00000577527 | 578 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR4K8P-201 | ENST00000578842 | 1048 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC116003.1-202 | ENST00000579386 | 501 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC006116.3-201 | ENST00000592968 | 361 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL356130.2-201 | ENST00000612554 | 404 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | TEX41-265 | ENST00000627785 | 704 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ATM-228 | ENST00000639240 | 498 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL122126.1-201 | ENST00000546905 | 1318 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ZNF736P3Y-201 | ENST00000428264 | 1465 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | WDR72-202 | ENST00000396328 | 7507 nt | APPRIS P2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | ALS2CR12-202 | ENST00000392257 | 1943 nt | APPRIS ALT2 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SLC15A2-201 | ENST00000295605 | 2379 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | CEP164P1-202 | ENST00000456938 | 2472 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SCN3A-203 | ENST00000409101 | 6599 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | DGKH-210 | ENST00000628433 | 3449 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR2T7-202 | ENST00000641557 | 3409 nt | APPRIS P1 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | GABRG2-202 | ENST00000361925 | 3767 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | Y_RNA.22-201 | ENST00000362492 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RNU1-130P-201 | ENST00000363930 | 160 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SNORA74A-201 | ENST00000364089 | 198 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SNORD82-201 | ENST00000365530 | 70 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RNY3P13-201 | ENST00000365542 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | Y_RNA.387-201 | ENST00000383918 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RNU6-39P-201 | ENST00000384344 | 107 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MIR454-201 | ENST00000390180 | 115 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | TRAV8-1-201 | ENST00000390430 | 473 nt | APPRIS P1 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPL21P67-201 | ENST00000402896 | 478 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SAMD12-202 | ENST00000409003 | 8866 nt | APPRIS P1 TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPL23AP27-201 | ENST00000415161 | 451 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC005062.1-206 | ENST00000424516 | 710 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | BX088651.2-201 | ENST00000425493 | 3614 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | LINC01037-201 | ENST00000427337 | 424 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC068481.1-202 | ENST00000428379 | 555 nt | TSL 4 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC092811.1-201 | ENST00000428642 | 397 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL590999.1-204 | ENST00000430595 | 638 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL158835.2-201 | ENST00000430970 | 300 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RPL34P6-201 | ENST00000432390 | 345 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC000374.1-201 | ENST00000434698 | 1745 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | PARGP1-202 | ENST00000440803 | 790 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | FKTN-204 | ENST00000448551 | 1700 nt | TSL 2 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AL592431.1-201 | ENST00000451090 | 317 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | MTND3P16-201 | ENST00000452205 | 344 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC108059.3-201 | ENST00000456388 | 214 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | SNORD19B-201 | ENST00000459623 | 84 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC010395.1-201 | ENST00000507627 | 697 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RN7SKP13-201 | ENST00000515933 | 244 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | RN7SKP66-201 | ENST00000516681 | 231 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | FAM184A-212 | ENST00000522284 | 2721 nt | TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | OR4P1P-201 | ENST00000530808 | 1136 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| CRTC3 | Q6UUV7 | AC055878.1-201 | ENST00000531858 | 281 nt | TSL 3 BASIC | 5.1 | □□□□□ -1.59 | | |