Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 AC009313.2-201ENST00000417893 1941 ntBASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 AC105074.1-201ENST00000623380 3095 ntBASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 AC093775.1-201ENST00000624154 1868 ntBASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
USPL1Q5W0Q7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC133552.1-201ENST00000569988 4007 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC114546.3-201ENST00000623582 1734 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RNU6-28P-201ENST00000362378 107 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 SNORA73.1-201ENST00000363107 205 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RNU6-169P-201ENST00000365336 107 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AL354719.1-201ENST00000406535 843 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RGS17P1-201ENST00000423358 553 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RPL36AP53-201ENST00000432891 316 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RPL7P12-201ENST00000446719 750 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC012123.2-201ENST00000485809 248 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 NIPA2P2-201ENST00000496376 1083 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 PCBP2P3-201ENST00000509726 843 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AP001781.1-201ENST00000530977 207 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC078814.3-201ENST00000553036 491 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC006349.1-201ENST00000555526 235 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AL356432.3-201ENST00000568952 465 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC069061.3-201ENST00000582254 823 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 MIR3939-201ENST00000582614 106 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 AC022432.1-201ENST00000595739 310 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 uc_338.5-201ENST00000611839 155 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 SLC2A3P1-201ENST00000519666 1451 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
USPL1Q5W0Q7 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 FRG1CP-201ENST00000358464 769 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RNU6-223P-201ENST00000362830 107 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RNA5SP509-201ENST00000364577 119 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RNU1-82P-201ENST00000390851 165 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AL356421.1-201ENST00000403255 413 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RN7SKP140-201ENST00000411196 284 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC009161.1-201ENST00000417306 376 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RPL35AP12-201ENST00000425362 338 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 MTND6P18-201ENST00000439477 513 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 HMGB3P9-201ENST00000441799 583 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 CYCSP24-201ENST00000445119 316 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 HMGB1P15-201ENST00000453854 435 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC105029.1-201ENST00000520250 669 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC022616.3-201ENST00000523940 148 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 OR4R1P-201ENST00000529879 463 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 SETP2-201ENST00000553886 926 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC105129.1-201ENST00000560250 297 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 RN7SL652P-201ENST00000577769 300 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC007687.1-201ENST00000602704 304 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC115621.1-201ENST00000604653 858 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC022106.2-201ENST00000620114 757 ntBASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
USPL1Q5W0Q7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms