Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 SAMMSON-210ENST00000641260 1308 ntBASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.43□□□□□ -1.38
PRPF38BQ5VTL8 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MTND5P7-201ENST00000413558 1798 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 ZNF658B-201ENST00000602828 3408 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 LCOR-201ENST00000286067 4542 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 RNU6-1059P-201ENST00000363752 98 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 SNORD14.1-201ENST00000365609 90 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 Y_RNA.461-201ENST00000384263 103 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 SNORA41-201ENST00000384675 132 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MRPS18CP6-201ENST00000423587 223 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC108075.1-201ENST00000424692 529 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC073410.1-201ENST00000435125 589 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC096775.1-201ENST00000437724 448 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 FABP5P2-201ENST00000439042 408 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 RPL21P2-201ENST00000440049 481 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC011742.2-201ENST00000443818 352 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC007967.1-201ENST00000455422 1159 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC112492.4-201ENST00000456549 352 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC245028.2-201ENST00000458673 253 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 RPL9P32-201ENST00000464118 620 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 RPS23P3-201ENST00000470993 430 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 IGLV2-34-201ENST00000490007 283 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC097486.1-201ENST00000515331 210 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 Z98751.3-201ENST00000604447 521 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 IGHV3-29-201ENST00000604817 344 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC006329.2-201ENST00000611491 394 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC074140.1-201ENST00000621617 208 ntBASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRPF38BQ5VTL8 EIF2AP4-201ENST00000424793 1781 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AL596244.1-201ENST00000567068 3779 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AP000756.2-201ENST00000624168 2567 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 SOCS5P3-201ENST00000425115 1576 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 DDX10P1-201ENST00000448545 1933 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 RNA5SP91-201ENST00000390902 119 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 RNU2-50P-201ENST00000410494 143 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 RPL31P2-201ENST00000413849 377 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 RPL18P10-201ENST00000425606 538 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 HMGB1P9-201ENST00000429856 646 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AL445928.1-201ENST00000435545 222 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC084198.1-201ENST00000477747 402 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AP000926.1-201ENST00000479573 241 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 HMGB3P17-201ENST00000504195 649 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 RNU6-390P-201ENST00000516259 103 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 CR383656.7-201ENST00000548164 174 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 AC091516.1-201ENST00000549191 703 ntBASIC6.41□□□□□ -1.38
PRPF38BQ5VTL8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms