Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.25□□□□□ -2.05
RIF1Q5UIP0 AC244517.3-201ENST00000616254 1235 ntBASIC2.25□□□□□ -2.05
RIF1Q5UIP0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.25□□□□□ -2.05
RIF1Q5UIP0 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 RPL23AP58-201ENST00000440453 469 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 RPL21P41-201ENST00000459863 264 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 MIR5007-201ENST00000583098 95 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 MIR5092-201ENST00000583139 88 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC245517.5-201ENST00000611529 162 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC002064.3-201ENST00000623448 346 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 Z99496.1-201ENST00000469424 1477 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 OR52B1P-201ENST00000316506 909 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AL158825.1-201ENST00000414735 521 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 VDAC1P3-201ENST00000434069 851 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 RPL7P54-201ENST00000438336 674 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 RPS6P2-201ENST00000454208 705 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AL355836.1-201ENST00000555951 870 ntBASIC2.24□□□□□ -2.05
RIF1Q5UIP0 AC097634.1-201ENST00000604491 2467 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 Y_RNA.191-201ENST00000363972 113 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 RPS7P13-201ENST00000413955 498 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 PTP4A1P7-201ENST00000423476 514 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AC068657.1-201ENST00000520807 306 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AC068339.2-201ENST00000534395 618 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 RPL9P7-201ENST00000330965 580 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 RPL31P1-201ENST00000398116 372 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AL355379.1-201ENST00000405542 640 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 OR5D17P-201ENST00000531492 978 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AC135279.1-201ENST00000543493 504 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AL022099.1-201ENST00000604551 712 ntBASIC2.23□□□□□ -2.05
RIF1Q5UIP0 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
RIF1Q5UIP0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 RNY1P14-201ENST00000384426 108 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 AC127526.1-201ENST00000417526 366 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 CACYBPP1-201ENST00000438592 684 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 RPL12P25-201ENST00000455592 494 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 APOOP1-201ENST00000604695 592 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 RMST_8.1-201ENST00000610287 165 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 AP1B1P2-201ENST00000416196 106 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 MTCO2P17-201ENST00000424336 677 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 RPS3AP4-201ENST00000555161 764 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 AC103968.1-201ENST00000557841 573 ntBASIC2.22□□□□□ -2.05
RIF1Q5UIP0 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.22□□□□□ -2.05
RIF1Q5UIP0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
RIF1Q5UIP0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RIF1Q5UIP0 MAPK10-322ENST00000641485 4530 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 FRG1BP-201ENST00000278882 761 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RIF1Q5UIP0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.21□□□□□ -2.06
RIF1Q5UIP0 MLLT10P2-201ENST00000506434 249 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 AC026241.1-201ENST00000517873 2142 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 AC011611.5-201ENST00000552477 578 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 RN7SL622P-201ENST00000585292 275 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 MIR6504-201ENST00000613520 61 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 LINC00216-201ENST00000623548 1126 ntBASIC2.21□□□□□ -2.06
RIF1Q5UIP0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.21□□□□□ -2.06
RIF1Q5UIP0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RIF1Q5UIP0 RNU1-75P-201ENST00000347264 129 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 RNU2-17P-201ENST00000410290 190 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC2.2□□□□□ -2.06
RIF1Q5UIP0 CCNHP1-201ENST00000513311 678 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 AC021733.2-201ENST00000518830 497 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 HMGN2P47-201ENST00000559378 272 ntBASIC2.2□□□□□ -2.06
RIF1Q5UIP0 AC005046.1-201ENST00000608515 625 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms