Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RNU6-346P-201ENST00000516288 111 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SNORA40.14-201ENST00000516543 86 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 RN7SKP82-201ENST00000516786 223 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 HMGB1P40-201ENST00000525121 540 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 HSPE1P2-201ENST00000554777 306 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 HSPE1P3-201ENST00000559254 309 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC005344.1-201ENST00000613391 459 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL138825.1-201ENST00000618587 192 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AL159972.1-201ENST00000625150 448 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC021753.1-201ENST00000635724 168 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 CYP4F35P-202ENST00000636121 390 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 IQCB2P-201ENST00000401788 1633 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 KPNA2P2-201ENST00000419546 1489 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 DDX18P3-201ENST00000404856 2007 ntBASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RSPO4Q2I0M5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC096921.2-201ENST00000561507 1916 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC025125.1-201ENST00000624743 1922 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 NAMPTP1-201ENST00000440465 2514 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MIR133B-201ENST00000362210 119 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP505-201ENST00000364748 108 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MIR551A-201ENST00000385042 96 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RN7SKP126-201ENST00000411143 300 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RNA5SP498-201ENST00000411342 120 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MYL6P5-201ENST00000412707 459 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RPL12P34-201ENST00000424532 479 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC093655.2-201ENST00000425735 631 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 ACA64.4-201ENST00000459070 127 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RPL23AP41-201ENST00000484754 458 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC093852.1-201ENST00000503587 266 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RNU6-307P-201ENST00000516743 106 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 IGHV1-14-201ENST00000523391 241 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC087441.2-201ENST00000529141 262 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AP003733.2-201ENST00000529409 171 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AP000907.2-201ENST00000530827 353 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 OR11H5P-201ENST00000554039 926 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MIR5188-201ENST00000583467 113 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MAGOH2P-202ENST00000584384 429 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC087385.3-201ENST00000620477 187 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 MIR4272-201ENST00000635924 64 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 AC244517.1-201ENST00000606030 2086 ntBASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.42□□□□□ -1.54
RSPO4Q2I0M5 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AL121886.1-201ENST00000358609 435 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 RNU6-343P-201ENST00000364709 104 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 Y_RNA.577-201ENST00000384794 101 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 MIR558-201ENST00000384920 94 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 SNORA48.7-201ENST00000391302 135 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC116036.1-201ENST00000412199 367 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC119751.6-201ENST00000416712 186 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC096632.1-201ENST00000427395 310 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 AC093156.1-201ENST00000440382 670 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 RPS3AP12-201ENST00000443616 753 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 FCF1P4-201ENST00000448326 183 ntBASIC5.41□□□□□ -1.54
RSPO4Q2I0M5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms