Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN6P56747 RNU6-1226P-201ENST00000384317 107 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 MIR591-201ENST00000385290 95 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 ATF1P1-201ENST00000406040 927 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 RNU4-78P-201ENST00000410940 126 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AL356968.1-201ENST00000416622 474 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 RPS3AP9-201ENST00000417027 792 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 PAICSP7-201ENST00000419829 962 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 MTCYBP31-201ENST00000438855 1122 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN6P56747 AC108938.1-201ENST00000451204 136 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN6P56747 snoU13.3-201ENST00000459441 104 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 OR2A20P-203ENST00000498397 1268 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 HMGB1P22-201ENST00000505315 124 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN6P56747 AC103783.1-201ENST00000520506 373 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AP001636.2-201ENST00000525517 696 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AC006518.1-201ENST00000541449 943 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN6P56747 AC092470.1-201ENST00000546187 132 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AC010198.2-201ENST00000550612 259 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 MIR5047-201ENST00000579212 100 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN6P56747 AC113368.1-201ENST00000603736 382 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 HSPE1P14-201ENST00000605812 302 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 MIR6715A-201ENST00000615929 79 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AC099506.2-201ENST00000623074 221 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AC020923.1-201ENST00000624021 917 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN6P56747 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CLDN6P56747 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN6P56747 ZNF734P-201ENST00000419494 1534 ntBASIC3.03□□□□□ -1.92
CLDN6P56747 AL672296.1-201ENST00000427780 2158 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 MTND4P34-201ENST00000572715 1371 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 OR5BR1P-201ENST00000524992 1330 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AL136360.1-201ENST00000503377 1900 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 FTLP6-201ENST00000355274 422 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 RNU6-444P-201ENST00000383988 108 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CLDN6P56747 AL583834.1-201ENST00000406943 343 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 RNA5SP229-201ENST00000410809 99 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AC114973.1-201ENST00000429057 632 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 ZFAND6P1-201ENST00000434138 605 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 BX679664.1-201ENST00000434429 253 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN6P56747 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN6P56747 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN6P56747 BX248409.1-201ENST00000455497 255 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 NECAP1P2-201ENST00000455668 727 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN6P56747 RPS4XP2-201ENST00000458402 793 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AC010285.1-201ENST00000470580 392 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 AC021205.2-201ENST00000480069 347 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 MTCO3P35-201ENST00000485582 781 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN6P56747 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 MTCO2P32-201ENST00000514865 403 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 FABP5P12-201ENST00000515543 389 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 MIR2276-201ENST00000516886 89 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 PDCL2P2-201ENST00000533651 189 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.02□□□□□ -1.93
CLDN6P56747 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN6P56747 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN6P56747 uc_338.25-201ENST00000613756 156 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLDN6P56747 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN6P56747 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.02□□□□□ -1.93
CLDN6P56747 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN6P56747 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 AL645568.2-201ENST00000432815 1337 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 AL355578.1-201ENST00000607405 1328 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN6P56747 RNU1-75P-201ENST00000347264 129 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 SNORA71.1-201ENST00000364523 117 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 MIR525-201ENST00000384978 85 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 RNA5SP129-201ENST00000410276 118 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 UBE2V1P9-201ENST00000414760 368 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 OFD1P18Y-201ENST00000420889 959 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 RPS7P2-201ENST00000435134 607 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.01□□□□□ -1.93
CLDN6P56747 AL135938.1-201ENST00000443141 297 ntBASIC3.01□□□□□ -1.93
CLDN6P56747 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN6P56747 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.01□□□□□ -1.93
CLDN6P56747 NPM1P13-201ENST00000452663 865 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms