Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC104985.3-201ENST00000623479 597 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.59□□□□□ -1.83
HMGCS2P54868 AL590396.4-201ENST00000636779 956 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 DCAF13P1-201ENST00000495256 1330 ntBASIC3.59□□□□□ -1.83
HMGCS2P54868 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGCS2P54868 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
HMGCS2P54868 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS2P54868 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.84
HMGCS2P54868 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HMGCS2P54868 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HMGCS2P54868 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HMGCS2P54868 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 RNU6-236P-201ENST00000363886 106 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 TAF13P2-201ENST00000416876 286 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC027644.1-201ENST00000419595 298 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 RPL7P53-201ENST00000421245 739 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AL513175.1-201ENST00000431492 780 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS2P54868 USP9YP7-201ENST00000436723 430 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC112492.1-201ENST00000449607 712 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 USP9YP32-201ENST00000452432 430 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC244505.3-201ENST00000454598 187 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 HMGB3P30-201ENST00000457863 606 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC087385.1-201ENST00000475062 312 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 VN1R104P-201ENST00000505115 1009 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC104108.1-201ENST00000509930 412 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC119751.1-201ENST00000513357 765 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC008494.2-201ENST00000514544 370 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 RNA5SP356-201ENST00000515972 94 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC139103.1-201ENST00000534696 1030 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC074029.1-201ENST00000552531 1044 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 GTF3AP2-201ENST00000557014 266 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC091046.2-201ENST00000620775 665 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.58□□□□□ -1.84
HMGCS2P54868 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS2P54868 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
HMGCS2P54868 AC106754.1-201ENST00000562632 1513 ntBASIC3.58□□□□□ -1.84
HMGCS2P54868 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS2P54868 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS2P54868 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HMGCS2P54868 AL353746.1-201ENST00000566293 6881 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 SNORA70E-201ENST00000384492 135 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCS2P54868 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGCS2P54868 PTGES3P1-201ENST00000439531 483 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 HMGB3P11-201ENST00000440127 604 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 MTCO1P53-201ENST00000441633 699 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 EXOSC3P1-201ENST00000448649 500 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AL009048.1-201ENST00000450437 298 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 MRPL35P4-201ENST00000453682 566 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AC021205.2-201ENST00000480069 347 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC091860.1-201ENST00000505723 432 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AC090071.1-201ENST00000507713 644 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AC010460.2-201ENST00000509054 677 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 RNU6-416P-201ENST00000516265 103 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 RNU6-1028P-201ENST00000517164 93 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGCS2P54868 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCS2P54868 TGIF1P1-201ENST00000558095 802 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AL049838.1-201ENST00000563647 981 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCS2P54868 NTAN1P1-201ENST00000603150 646 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AC024060.1-201ENST00000607052 494 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
HMGCS2P54868 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 AC006065.5-201ENST00000623427 349 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCS2P54868 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCS2P54868 AF117829.1-206ENST00000621883 3802 ntBASIC3.57□□□□□ -1.84
HMGCS2P54868 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGCS2P54868 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCS2P54868 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HMGCS2P54868 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCS2P54868 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGCS2P54868 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms