Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 RNY1P16-201ENST00000363063 111 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 Y_RNA.471-201ENST00000384312 102 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 RNU6-125P-201ENST00000384505 107 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 MIR92A2-201ENST00000385299 75 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 SAR1AP2-201ENST00000392696 594 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 RNA5SP178-201ENST00000410380 128 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF144AP50876 Z82198.3-201ENST00000421145 199 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AL031736.2-201ENST00000426573 787 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF144AP50876 TMSB4XP3-201ENST00000445144 114 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AC104164.1-201ENST00000460282 590 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF144AP50876 RNU4-71P-201ENST00000516258 113 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AC100870.1-201ENST00000522035 505 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.72□□□□□ -1.49
RNF144AP50876 CYCSP25-201ENST00000525280 316 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.72□□□□□ -1.49
RNF144AP50876 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 AC006512.2-201ENST00000543250 486 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.72□□□□□ -1.49
RNF144AP50876 ELOCP5-201ENST00000604924 333 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 SNHG22-203ENST00000617833 660 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.72□□□□□ -1.49
RNF144AP50876 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 DNM1P47-203ENST00000571780 12667 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 AC232271.1-201ENST00000602455 2715 ntBASIC5.72□□□□□ -1.49
RNF144AP50876 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RNF144AP50876 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.71□□□□□ -1.49
RNF144AP50876 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RNF144AP50876 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
RNF144AP50876 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
RNF144AP50876 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 AL391987.6-201ENST00000305671 199 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 Y_RNA.54-201ENST00000362766 105 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNU1-49P-201ENST00000363468 159 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNY1-201ENST00000364228 113 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 SNORD113-1-201ENST00000365321 69 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF144AP50876 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 RNU6-637P-201ENST00000384050 107 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNU6-701P-201ENST00000384059 107 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNU6-754P-201ENST00000391166 107 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNA5SP36-201ENST00000410197 133 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNU6-174P-201ENST00000410406 106 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AL591704.1-201ENST00000432574 275 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF144AP50876 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF144AP50876 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF144AP50876 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF144AP50876 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 snoU13.7-201ENST00000459220 104 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RNU7-138P-201ENST00000459479 64 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AP000942.1-201ENST00000463969 747 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 RN7SL643P-201ENST00000471845 291 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF144AP50876 ZNF519P4-201ENST00000514008 125 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 CDH12P4-201ENST00000517835 295 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 CDH12P3-201ENST00000517935 295 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 IGKV2-19-201ENST00000518132 283 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 CDH12P1-201ENST00000518435 295 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 IGHV4-55-201ENST00000520889 368 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 AC138207.8-204ENST00000579588 527 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 MIR4273-201ENST00000582824 84 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF144AP50876 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 AC010620.2-201ENST00000600135 313 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 AP001282.2-201ENST00000616149 309 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RNF144AP50876 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RNF144AP50876 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.71□□□□□ -1.5
RNF144AP50876 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 AL359854.1-201ENST00000614203 1594 ntBASIC5.71□□□□□ -1.5
RNF144AP50876 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF144AP50876 AC093671.1-201ENST00000624981 2929 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms