Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ERLEC1P1-201ENST00000433806 578 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL359265.2-201ENST00000434367 631 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RPL35AP22-201ENST00000436855 335 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 BX679664.2-201ENST00000439282 283 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC12P31275 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC016696.1-201ENST00000446949 318 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 HMGN2P26-201ENST00000463169 339 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 MRPS17P3-201ENST00000465453 385 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC023424.1-201ENST00000496058 459 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC072052.1-201ENST00000496556 306 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RN7SKP234-201ENST00000517173 224 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 OR5D15P-201ENST00000531671 942 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC12P31275 AL049779.2-201ENST00000553847 315 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 OR1F2P-201ENST00000570470 933 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AL355375.2-201ENST00000574825 175 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC233702.9-201ENST00000581528 203 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC012616.1-201ENST00000600294 197 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 AC087763.1-201ENST00000603391 286 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 RNU6-89P-201ENST00000606519 100 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC12P31275 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC12P31275 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC023421.1-201ENST00000590535 1785 ntBASIC4.9□□□□□ -1.63
HOXC12P31275 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC12P31275 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HOXC12P31275 AC083843.3-201ENST00000623679 2186 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 OR4F13P-202ENST00000560066 2054 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC12P31275 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 Y_RNA.231-201ENST00000364358 102 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 SNORA51.2-201ENST00000364595 132 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RNU4-66P-201ENST00000365199 138 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 DBIP1-201ENST00000401435 260 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AL136372.1-201ENST00000403060 228 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 TXNP7-201ENST00000406296 293 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RNU2-36P-201ENST00000410361 191 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RN7SKP159-201ENST00000410657 292 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RNU6-193P-201ENST00000410977 107 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AC092447.6-201ENST00000414578 210 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AL391219.1-201ENST00000422570 483 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AL590399.2-201ENST00000427536 309 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC12P31275 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC12P31275 RPL7L1P9-201ENST00000431298 745 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AL121877.1-201ENST00000453704 622 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AC007547.1-201ENST00000462177 490 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RPL7AP6-201ENST00000477943 801 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RPL21P99-201ENST00000480369 423 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RPSAP50-201ENST00000481955 852 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 GLUD1P3-202ENST00000508551 200 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 RNU4-49P-201ENST00000516080 140 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 NARSP2-201ENST00000518524 679 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 HMGN1P28-201ENST00000521340 364 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC12P31275 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC12P31275 PSMA3P-201ENST00000555485 635 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC12P31275 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 AL049539.1-201ENST00000611964 459 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 MIR1302-1-201ENST00000637932 143 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
HOXC12P31275 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC12P31275 AC004972.1-201ENST00000623934 2209 ntBASIC4.89□□□□□ -1.63
HOXC12P31275 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC12P31275 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms