Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC022861.1-201ENST00000522981 663 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 AC025884.1-201ENST00000556034 378 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 NDUFB4P11-201ENST00000560510 395 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC034105.3-201ENST00000565294 442 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 RPS3AP23-202ENST00000574601 686 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC5.85□□□□□ -1.47
LMNB1P20700 PSMA6P4-201ENST00000603247 718 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.85□□□□□ -1.47
LMNB1P20700 OR10AB1P-201ENST00000609613 938 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 BX664608.1-201ENST00000610519 487 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 BX005214.3-202ENST00000619809 325 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC006504.8-201ENST00000621046 635 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 YWHAEP7-203ENST00000622054 312 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 AC091953.2-201ENST00000623979 160 ntBASIC5.85□□□□□ -1.47
LMNB1P20700 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
LMNB1P20700 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
LMNB1P20700 LINC00622-201ENST00000562811 1570 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
LMNB1P20700 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
LMNB1P20700 AC092079.1-201ENST00000558620 1985 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
LMNB1P20700 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
LMNB1P20700 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LMNB1P20700 RNU6-359P-201ENST00000365466 108 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 BTBD10P2-201ENST00000404779 676 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 SNRPEP10-201ENST00000420249 274 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL513185.2-201ENST00000425543 193 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.84□□□□□ -1.47
LMNB1P20700 OR4C10P-201ENST00000434991 931 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 RPS15AP9-201ENST00000439856 381 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 RPL7L1P1-201ENST00000448259 785 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AC006511.1-201ENST00000470614 315 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL136126.1-201ENST00000473603 402 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 SNORA67.7-201ENST00000516664 135 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.84□□□□□ -1.47
LMNB1P20700 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
LMNB1P20700 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.84□□□□□ -1.47
LMNB1P20700 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.84□□□□□ -1.47
LMNB1P20700 AL049839.1-201ENST00000556151 657 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 RN7SL652P-201ENST00000577769 300 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 RN7SL290P-201ENST00000578661 300 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 MIR5699-201ENST00000578903 90 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.84□□□□□ -1.47
LMNB1P20700 NRBF2P5-201ENST00000603087 788 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL121932.1-201ENST00000605542 214 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.84□□□□□ -1.47
LMNB1P20700 AC009233.1-201ENST00000616477 371 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AC006133.1-201ENST00000617106 264 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 AL022401.1-201ENST00000619498 108 ntBASIC5.84□□□□□ -1.47
LMNB1P20700 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
LMNB1P20700 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LMNB1P20700 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
LMNB1P20700 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
LMNB1P20700 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
LMNB1P20700 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.84□□□□□ -1.48
LMNB1P20700 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.83□□□□□ -1.48
LMNB1P20700 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.83□□□□□ -1.48
LMNB1P20700 RNU6-1322P-201ENST00000364309 107 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 RNA5SP187-201ENST00000384400 119 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 RPS4XP8-201ENST00000402039 771 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 RN7SKP267-201ENST00000410381 285 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 RNA5SP44-201ENST00000410446 133 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 OR9R1P-201ENST00000412200 877 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC140479.3-201ENST00000418944 1126 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC007283.2-201ENST00000424739 197 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 HMGB3P12-201ENST00000438745 556 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 PHBP16-201ENST00000446318 950 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.83□□□□□ -1.48
LMNB1P20700 RPS20P32-201ENST00000456044 356 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.83□□□□□ -1.48
LMNB1P20700 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.83□□□□□ -1.48
LMNB1P20700 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.83□□□□□ -1.48
LMNB1P20700 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.83□□□□□ -1.48
LMNB1P20700 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.83□□□□□ -1.48
LMNB1P20700 RNU6-835P-201ENST00000516974 104 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC107934.1-201ENST00000522215 217 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.83□□□□□ -1.48
LMNB1P20700 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LMNB1P20700 MIR4444-1-201ENST00000581696 74 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 MIR3158-1-201ENST00000583596 81 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 MIR4444-2-201ENST00000584390 74 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.83□□□□□ -1.48
LMNB1P20700 AC011468.4-201ENST00000603942 409 ntBASIC5.83□□□□□ -1.48
LMNB1P20700 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms