Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL159169.3-201ENST00000608871 561 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 AL592148.2-201ENST00000612210 372 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
XRCC1P18887 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.36□□□□□ -1.87
XRCC1P18887 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.36□□□□□ -1.87
XRCC1P18887 AC007496.3-201ENST00000624987 3443 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
XRCC1P18887 AL645937.1-201ENST00000641739 1652 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 MTND5P1-201ENST00000445440 1375 ntBASIC3.36□□□□□ -1.87
XRCC1P18887 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
XRCC1P18887 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 MT-TC-201ENST00000387405 66 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 MTCO1P56-201ENST00000401674 224 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL121972.1-201ENST00000402023 252 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC126124.2-201ENST00000413542 321 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 EI24P1-201ENST00000416584 867 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 RPL23AP22-201ENST00000437556 453 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 RPL23AP16-201ENST00000441715 421 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC004022.1-201ENST00000447766 1066 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 TRBV26-201ENST00000456572 344 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 RPS27P29-201ENST00000463110 252 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 KLRA1P-201ENST00000503499 986 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 HSPD1P15-201ENST00000505573 1122 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 SUMO2P5-201ENST00000506790 245 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 TXNP6-201ENST00000510190 310 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 RNU6-885P-201ENST00000516607 104 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 SNORA70.19-201ENST00000516717 90 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 RN7SKP116-201ENST00000516902 319 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 AP000790.1-201ENST00000528891 737 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 DEFB130C-202ENST00000530001 230 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC010928.3-201ENST00000587712 541 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 BNIP3P27-201ENST00000599991 412 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 GAS5-AS1-201ENST00000602767 694 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL583856.2-201ENST00000606298 543 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC096577.2-201ENST00000611455 153 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 AC018816.2-201ENST00000621460 353 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AL157770.1-201ENST00000623049 439 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC110801.1-201ENST00000623590 212 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC048347.1-201ENST00000624621 427 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 AC026634.1-201ENST00000634369 198 ntBASIC3.35□□□□□ -1.87
XRCC1P18887 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.35□□□□□ -1.87
XRCC1P18887 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
XRCC1P18887 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.34□□□□□ -1.87
XRCC1P18887 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 AC092326.2-201ENST00000624772 1561 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
XRCC1P18887 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 SNORD56.3-201ENST00000363507 71 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.34□□□□□ -1.87
XRCC1P18887 MIR217-201ENST00000384817 110 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 RNU6-298P-201ENST00000390888 96 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AL023807.1-201ENST00000407932 359 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 FCF1P2-201ENST00000415284 583 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 MTND4P3-201ENST00000417829 541 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AC244098.2-201ENST00000422068 99 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 Z93242.1-201ENST00000427102 353 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 RPL23AP82-202ENST00000427528 469 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AC005345.1-201ENST00000431868 217 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.34□□□□□ -1.87
XRCC1P18887 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.34□□□□□ -1.87
XRCC1P18887 RPS20P32-201ENST00000456044 356 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 MTCO3P2-201ENST00000457365 171 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 CENPBD1P1-201ENST00000464061 469 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 RN7SL601P-201ENST00000471221 293 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AC010301.1-201ENST00000473936 355 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 VPS26AP1-201ENST00000483197 979 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 AC078918.1-201ENST00000498515 228 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 DYNLL1P6-201ENST00000503440 264 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms