Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.3□□□□□ -1.56
ITGA4P13612 AL513533.1-201ENST00000453728 415 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC099560.2-201ENST00000457554 255 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 RPL23AP72-201ENST00000492447 435 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC090572.1-201ENST00000519251 160 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.3□□□□□ -1.56
ITGA4P13612 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC007424.1-203ENST00000554613 687 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.3□□□□□ -1.56
ITGA4P13612 RN7SL435P-201ENST00000584418 282 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.3□□□□□ -1.56
ITGA4P13612 UBE2L4-201ENST00000587688 464 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC234771.5-201ENST00000600161 514 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC064836.2-201ENST00000609491 462 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 MIR6798-201ENST00000612887 67 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AL158801.5-201ENST00000623123 465 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AC015871.5-202ENST00000623252 701 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.3□□□□□ -1.56
ITGA4P13612 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.3□□□□□ -1.56
ITGA4P13612 AC114546.3-201ENST00000623582 1734 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
ITGA4P13612 AL118496.1-201ENST00000440201 1812 ntBASIC5.3□□□□□ -1.56
ITGA4P13612 AL592148.3-201ENST00000608771 2646 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 AL731566.1-201ENST00000620490 1937 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 SALL4P2-201ENST00000423288 2910 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 AL356057.2-201ENST00000403318 432 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 RN7SKP235-201ENST00000410662 305 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.29□□□□□ -1.56
ITGA4P13612 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 AC114495.1-201ENST00000441274 436 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC000111.2-201ENST00000448200 210 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 RPL7P52-201ENST00000449200 742 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 snoU13.8-201ENST00000458890 104 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 RPS17P2-201ENST00000461663 408 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 MTCO2P29-201ENST00000465212 189 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.29□□□□□ -1.56
ITGA4P13612 RPL23AP41-201ENST00000484754 458 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 RNA5SP401-201ENST00000515920 127 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 RNA5SP337-201ENST00000517007 109 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 AP003072.2-201ENST00000527756 676 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC068993.1-201ENST00000546724 589 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 AC110743.1-201ENST00000584870 478 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC008782.1-201ENST00000603386 430 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC115621.1-201ENST00000604653 858 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC010424.2-201ENST00000607594 443 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 FAM27B-201ENST00000610601 213 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC135507.2-201ENST00000612443 309 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 MIR6864-201ENST00000617935 70 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 AL157700.1-201ENST00000561973 1432 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
ITGA4P13612 AC097063.1-201ENST00000426714 1797 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AL031595.2-201ENST00000624215 19071 ntBASIC5.29□□□□□ -1.56
ITGA4P13612 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
ITGA4P13612 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
ITGA4P13612 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ITGA4P13612 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ITGA4P13612 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.28□□□□□ -1.56
ITGA4P13612 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ITGA4P13612 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
ITGA4P13612 AC105074.1-201ENST00000623380 3095 ntBASIC5.28□□□□□ -1.56
ITGA4P13612 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
ITGA4P13612 RNU6-223P-201ENST00000362830 107 ntBASIC5.28□□□□□ -1.56
ITGA4P13612 Y_RNA.157-201ENST00000363638 102 ntBASIC5.28□□□□□ -1.56
ITGA4P13612 RNA5SP505-201ENST00000364748 108 ntBASIC5.28□□□□□ -1.56
ITGA4P13612 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
ITGA4P13612 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms