Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PF4V1P10720 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
PF4V1P10720 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PF4V1P10720 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PF4V1P10720 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.3□□□□□ -1.72
PF4V1P10720 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PF4V1P10720 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PF4V1P10720 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PF4V1P10720 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.3□□□□□ -1.72
PF4V1P10720 AC114774.1-201ENST00000507410 1770 ntBASIC4.3□□□□□ -1.72
PF4V1P10720 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PF4V1P10720 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 LINC00622-201ENST00000562811 1570 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 AC005294.1-201ENST00000355509 281 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RNU6-1120P-201ENST00000362988 108 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 Y_RNA.159-201ENST00000363674 87 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RNU6-960P-201ENST00000364056 120 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.29□□□□□ -1.72
PF4V1P10720 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.29□□□□□ -1.72
PF4V1P10720 AL807761.1-201ENST00000417622 171 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC018630.2-202ENST00000422992 927 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RPL23AP30-201ENST00000432419 501 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RPS20P5-201ENST00000434808 360 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 LINC02210-201ENST00000444561 288 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PF4V1P10720 RPS18P6-201ENST00000476880 458 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RPS17P5-201ENST00000498293 408 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RPS27AP13-201ENST00000498403 237 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 AC024558.1-201ENST00000505008 528 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.29□□□□□ -1.72
PF4V1P10720 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 RNA5SP468-201ENST00000516782 93 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 HMGB1P19-201ENST00000517578 577 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 MTND4LP26-201ENST00000518144 282 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 HMGN2P6-201ENST00000551091 273 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 RPS3AP4-201ENST00000555161 764 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 AL355836.1-201ENST00000555951 870 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC007687.1-201ENST00000602704 304 ntBASIC4.29□□□□□ -1.72
PF4V1P10720 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PF4V1P10720 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PF4V1P10720 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PF4V1P10720 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 RNU6-50P-201ENST00000362356 103 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 RNA5SP453-201ENST00000362503 119 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PF4V1P10720 CALM2P3-201ENST00000400429 449 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 MIR937-201ENST00000401271 86 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 DPPA2P3-201ENST00000411853 655 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC007161.1-204ENST00000423039 460 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 USP9YP18-201ENST00000425912 695 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 GSTM5P1-201ENST00000434751 660 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 GAPDHP58-201ENST00000438477 1006 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.28□□□□□ -1.72
PF4V1P10720 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PF4V1P10720 AC105399.1-202ENST00000447303 205 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 RPL23AP20-201ENST00000447965 421 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC019235.1-201ENST00000503847 207 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.28□□□□□ -1.72
PF4V1P10720 AC105914.1-201ENST00000511798 226 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.28□□□□□ -1.72
PF4V1P10720 IGKV2D-19-201ENST00000523346 262 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 HMGB1P40-201ENST00000525121 540 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 AP001922.4-201ENST00000526967 290 ntBASIC4.28□□□□□ -1.72
PF4V1P10720 OR4R1P-201ENST00000529879 463 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms