Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
APOBP04114 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 AL139156.1-201ENST00000412785 841 ntBASIC1.46□□□□□ -2.18
APOBP04114 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 IGLVIV-53-201ENST00000520107 367 ntBASIC1.46□□□□□ -2.18
APOBP04114 AC074029.1-201ENST00000552531 1044 ntBASIC1.46□□□□□ -2.18
APOBP04114 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.46□□□□□ -2.18
APOBP04114 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
APOBP04114 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.46□□□□□ -2.18
APOBP04114 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC1.46□□□□□ -2.18
APOBP04114 AL139276.1-201ENST00000311910 1001 ntBASIC1.45□□□□□ -2.18
APOBP04114 RNA5SP274-201ENST00000410484 108 ntBASIC1.45□□□□□ -2.18
APOBP04114 AC009414.1-201ENST00000427200 443 ntBASIC1.45□□□□□ -2.18
APOBP04114 AC103975.1-201ENST00000482506 483 ntBASIC1.45□□□□□ -2.18
APOBP04114 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.45□□□□□ -2.18
APOBP04114 RN7SKP60-201ENST00000516985 239 ntBASIC1.45□□□□□ -2.18
APOBP04114 AL133271.1-201ENST00000538229 291 ntBASIC1.45□□□□□ -2.18
APOBP04114 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 AC025946.2-201ENST00000603398 234 ntBASIC1.45□□□□□ -2.18
APOBP04114 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 BX005019.1-201ENST00000561881 1810 ntBASIC1.45□□□□□ -2.18
APOBP04114 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
APOBP04114 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 TRMT112P2-201ENST00000512910 132 ntBASIC1.45□□□□□ -2.18
APOBP04114 SNORA9.3-201ENST00000516383 129 ntBASIC1.45□□□□□ -2.18
APOBP04114 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 Z73965.1-201ENST00000623412 2297 ntBASIC1.45□□□□□ -2.18
APOBP04114 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 RNU6-14P-201ENST00000384630 106 ntBASIC1.45□□□□□ -2.18
APOBP04114 RNU6-1140P-201ENST00000410517 106 ntBASIC1.45□□□□□ -2.18
APOBP04114 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.45□□□□□ -2.18
APOBP04114 MTCO1P42-201ENST00000457379 726 ntBASIC1.45□□□□□ -2.18
APOBP04114 AC025881.1-201ENST00000518851 512 ntBASIC1.45□□□□□ -2.18
APOBP04114 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC1.45□□□□□ -2.18
APOBP04114 AL353729.1-201ENST00000425044 720 ntBASIC1.45□□□□□ -2.18
APOBP04114 AC092427.1-202ENST00000430569 476 ntBASIC1.45□□□□□ -2.18
APOBP04114 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 FGF7P3-201ENST00000454645 303 ntBASIC1.45□□□□□ -2.18
APOBP04114 NIPA2P2-201ENST00000496376 1083 ntBASIC1.45□□□□□ -2.18
APOBP04114 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.45□□□□□ -2.18
APOBP04114 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.45□□□□□ -2.18
APOBP04114 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
APOBP04114 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
APOBP04114 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC1.45□□□□□ -2.18
APOBP04114 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.45□□□□□ -2.18
APOBP04114 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC1.44□□□□□ -2.18
APOBP04114 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.44□□□□□ -2.18
APOBP04114 RN7SKP282-201ENST00000516824 299 ntBASIC1.44□□□□□ -2.18
APOBP04114 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 AP005136.1-201ENST00000579765 429 ntBASIC1.44□□□□□ -2.18
APOBP04114 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC1.44□□□□□ -2.18
APOBP04114 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC1.44□□□□□ -2.18
APOBP04114 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.44□□□□□ -2.18
APOBP04114 AC087385.1-201ENST00000475062 312 ntBASIC1.44□□□□□ -2.18
APOBP04114 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.44□□□□□ -2.18
APOBP04114 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBP04114 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
APOBP04114 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.44□□□□□ -2.18
APOBP04114 RPS20P25-201ENST00000412447 352 ntBASIC1.44□□□□□ -2.18
APOBP04114 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 Z82205.1-201ENST00000428456 297 ntBASIC1.44□□□□□ -2.18
APOBP04114 TRBV26-201ENST00000456572 344 ntBASIC1.44□□□□□ -2.18
APOBP04114 TXNP6-201ENST00000510190 310 ntBASIC1.44□□□□□ -2.18
APOBP04114 PDCL2P2-201ENST00000533651 189 ntBASIC1.44□□□□□ -2.18
APOBP04114 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBP04114 AC002064.3-201ENST00000623448 346 ntBASIC1.44□□□□□ -2.18
APOBP04114 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.44□□□□□ -2.18
APOBP04114 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
APOBP04114 AC002553.2-201ENST00000453217 340 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms