Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MIR4505-201ENST00000582238 73 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 MIR3149-201ENST00000584629 83 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.52□□□□□ -1.53
PDGFAP04085 AC020910.3-201ENST00000603701 874 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 FAM27E4-201ENST00000605259 342 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC007998.5-201ENST00000622938 237 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 AC018445.2-201ENST00000622987 260 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
PDGFAP04085 AC105235.1-201ENST00000623208 1816 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.52□□□□□ -1.53
PDGFAP04085 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 AP001541.1-201ENST00000623322 1904 ntBASIC5.52□□□□□ -1.53
PDGFAP04085 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDGFAP04085 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDGFAP04085 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
PDGFAP04085 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 SELENOWP1-201ENST00000322792 252 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 Y_RNA.5-201ENST00000362334 102 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RN7SKP128-201ENST00000364270 303 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-701P-201ENST00000384059 107 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-1032P-201ENST00000384100 107 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 SNORA5.1-201ENST00000384275 131 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-434P-201ENST00000384376 107 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-393P-201ENST00000384475 107 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-331P-201ENST00000384724 107 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-328P-201ENST00000390887 106 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL121835.1-201ENST00000404250 354 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNA5SP56-201ENST00000410277 118 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNA5SP111-201ENST00000411386 101 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL137014.1-201ENST00000420490 1226 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFAP04085 FAR2P4-202ENST00000425399 584 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC113412.1-201ENST00000425840 504 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL662874.1-201ENST00000426065 230 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 MTCYBP9-201ENST00000431021 303 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC126120.1-201ENST00000431082 470 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RPL23AP69-201ENST00000431134 458 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC104058.1-201ENST00000448028 297 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 RNU7-167P-201ENST00000459160 62 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RN7SL189P-201ENST00000468631 289 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC010631.1-201ENST00000474150 156 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 NDUFB5P1-201ENST00000508134 564 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 TBCAP3-201ENST00000512475 312 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 SNORA14.1-201ENST00000516113 141 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNA5SP34-201ENST00000516887 130 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RNU6-1213P-201ENST00000517075 94 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 IL7-206ENST00000520269 456 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 IGLV2-28-201ENST00000520681 304 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AP006245.2-201ENST00000522004 300 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 IGLV3-30-201ENST00000524362 298 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 COX6CP5-201ENST00000527162 228 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC073916.1-201ENST00000545095 130 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.51□□□□□ -1.53
PDGFAP04085 RPL23AP84-201ENST00000571193 464 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 MIR4503-201ENST00000582187 83 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 AL669831.4-202ENST00000590817 238 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 AL031320.1-201ENST00000604177 357 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 SUMO2P15-201ENST00000604285 278 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL034351.1-201ENST00000605288 668 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL158032.1-201ENST00000605401 106 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC145423.1-201ENST00000605712 336 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.51□□□□□ -1.53
PDGFAP04085 MIR6128-201ENST00000615528 109 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 AL691477.1-201ENST00000624398 162 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFAP04085 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.51□□□□□ -1.53
PDGFAP04085 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 AC107027.3-201ENST00000565095 3473 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
PDGFAP04085 AL672167.1-205ENST00000641112 3080 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
PDGFAP04085 AC092692.1-201ENST00000623625 2595 ntBASIC5.51□□□□□ -1.53
PDGFAP04085 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDGFAP04085 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms