Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.9□□□□□ -1.79
LDLRP01130 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
LDLRP01130 AL031667.3-201ENST00000620124 655 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC091953.5-201ENST00000622919 233 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC091965.5-201ENST00000624785 342 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC120349.2-201ENST00000625002 298 ntBASIC3.9□□□□□ -1.79
LDLRP01130 AC084035.1-201ENST00000634543 607 ntBASIC3.9□□□□□ -1.79
LDLRP01130 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
LDLRP01130 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 MTND4P34-201ENST00000572715 1371 ntBASIC3.89□□□□□ -1.79
LDLRP01130 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LDLRP01130 Y_RNA.194-201ENST00000363985 102 ntBASIC3.89□□□□□ -1.79
LDLRP01130 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
LDLRP01130 SNRPEP2-201ENST00000397592 279 ntBASIC3.89□□□□□ -1.79
LDLRP01130 RSL24D1P4-201ENST00000400938 484 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 AC069157.1-201ENST00000421749 137 ntBASIC3.89□□□□□ -1.79
LDLRP01130 SDCBPP2-201ENST00000424643 885 ntBASIC3.89□□□□□ -1.79
LDLRP01130 MTCYBP39-201ENST00000437562 491 ntBASIC3.89□□□□□ -1.79
LDLRP01130 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.89□□□□□ -1.79
LDLRP01130 MTCO1P48-201ENST00000448024 1096 ntBASIC3.89□□□□□ -1.79
LDLRP01130 NPM1P49-201ENST00000448027 714 ntBASIC3.89□□□□□ -1.79
LDLRP01130 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.89□□□□□ -1.79
LDLRP01130 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 RPL23AP81-201ENST00000455252 467 ntBASIC3.89□□□□□ -1.79
LDLRP01130 RPL37P6-202ENST00000464216 403 ntBASIC3.89□□□□□ -1.79
LDLRP01130 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.89□□□□□ -1.79
LDLRP01130 AC010460.1-201ENST00000507087 466 ntBASIC3.89□□□□□ -1.79
LDLRP01130 HMGB1P28-201ENST00000507778 552 ntBASIC3.89□□□□□ -1.79
LDLRP01130 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LDLRP01130 AC005798.1-201ENST00000513715 387 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 MTND1P5-201ENST00000517906 940 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDLRP01130 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 ELOCP32-201ENST00000548625 324 ntBASIC3.89□□□□□ -1.79
LDLRP01130 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.89□□□□□ -1.79
LDLRP01130 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.89□□□□□ -1.79
LDLRP01130 AC141257.3-201ENST00000572906 215 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC012213.3-201ENST00000577199 777 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.89□□□□□ -1.79
LDLRP01130 VN1R82P-201ENST00000601481 356 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC103881.1-201ENST00000603476 538 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AL161729.3-201ENST00000603533 673 ntBASIC3.89□□□□□ -1.79
LDLRP01130 BNIP3P11-201ENST00000603878 563 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC107304.1-201ENST00000604229 296 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AL049634.3-201ENST00000604968 457 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC105129.3-201ENST00000605455 485 ntBASIC3.89□□□□□ -1.79
LDLRP01130 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LDLRP01130 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.89□□□□□ -1.79
LDLRP01130 AC012442.3-202ENST00000636742 206 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC008013.2-202ENST00000637965 364 ntBASIC3.89□□□□□ -1.79
LDLRP01130 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
LDLRP01130 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
LDLRP01130 ZNF542P-204ENST00000482727 1305 ntBASIC3.89□□□□□ -1.79
LDLRP01130 DCAF13P1-201ENST00000495256 1330 ntBASIC3.89□□□□□ -1.79
LDLRP01130 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
LDLRP01130 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.89□□□□□ -1.79
LDLRP01130 ELL2P4-201ENST00000446870 1376 ntBASIC3.89□□□□□ -1.79
LDLRP01130 NCAPGP1-201ENST00000505112 1814 ntBASIC3.88□□□□□ -1.79
LDLRP01130 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 RLIMP1-201ENST00000339626 1680 ntBASIC3.88□□□□□ -1.79
LDLRP01130 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LDLRP01130 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 MIR483-201ENST00000385070 76 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AL450338.1-201ENST00000407987 512 ntBASIC3.88□□□□□ -1.79
LDLRP01130 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.88□□□□□ -1.79
LDLRP01130 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 RPS3AP9-201ENST00000417027 792 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AL365203.2-201ENST00000423444 196 ntBASIC3.88□□□□□ -1.79
LDLRP01130 OR8F1P-201ENST00000425243 930 ntBASIC3.88□□□□□ -1.79
LDLRP01130 OR5BE1P-201ENST00000425977 939 ntBASIC3.88□□□□□ -1.79
LDLRP01130 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.88□□□□□ -1.79
LDLRP01130 AL445584.1-201ENST00000431451 330 ntBASIC3.88□□□□□ -1.79
LDLRP01130 RPS25P9-201ENST00000435591 252 ntBASIC3.88□□□□□ -1.79
LDLRP01130 MTCO2P16-201ENST00000436962 677 ntBASIC3.88□□□□□ -1.79
LDLRP01130 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDLRP01130 MTCO3P2-201ENST00000457365 171 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 AC092757.1-201ENST00000467293 467 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDLRP01130 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.88□□□□□ -1.79
LDLRP01130 BTF3L4P4-201ENST00000506381 449 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms