Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 CYCSP28-201ENST00000534284 321 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 MIR3611-201ENST00000584484 83 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC006077.1-201ENST00000604746 343 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AP001521.1-201ENST00000609150 300 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 AC025594.3-201ENST00000613068 790 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 AL451142.2-201ENST00000429076 2090 ntBASIC5.74□□□□□ -1.49
RAPGEF3O95398 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RAPGEF3O95398 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RAPGEF3O95398 MARK2P15-201ENST00000432204 2186 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC005005.4-201ENST00000623789 16698 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 SNRPEP3-201ENST00000338402 276 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RNU6-374P-201ENST00000364146 108 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RNU4-75P-201ENST00000364621 146 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RNU2-28P-201ENST00000410457 189 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RPL7AP73-201ENST00000413490 353 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RPL36AP10-201ENST00000421785 322 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 CYCSP46-201ENST00000423569 204 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL512649.1-201ENST00000428997 581 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL512286.1-201ENST00000439244 400 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 MTCO1P48-201ENST00000448024 1096 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RN7SL429P-201ENST00000479090 223 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RN7SL489P-201ENST00000486185 223 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 RN7SL327P-201ENST00000488659 223 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC087276.1-201ENST00000529659 480 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 OR4A12P-201ENST00000530847 918 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 SULT1C2P1-202ENST00000562418 459 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 PCMTD1P2-201ENST00000565017 355 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC136618.2-201ENST00000575091 400 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC078795.2-201ENST00000602835 1252 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 RN7SL853P-201ENST00000617250 223 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL139089.1-201ENST00000620372 975 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL356266.1-201ENST00000623311 483 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.73□□□□□ -1.49
RAPGEF3O95398 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 MTND5P29-201ENST00000458676 1807 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AC026523.2-201ENST00000625039 7739 ntBASIC5.73□□□□□ -1.49
RAPGEF3O95398 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RAPGEF3O95398 AL022311.1-201ENST00000623726 19416 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC107081.3-201ENST00000612715 2034 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC004944.1-201ENST00000517807 3059 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 BTBD10P1-201ENST00000549824 1352 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 RNU6-462P-201ENST00000362659 105 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 SNORA38.1-201ENST00000364172 131 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RAPGEF3O95398 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 RPS24P1-201ENST00000438550 371 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 RBMY2UP-201ENST00000453474 324 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC022447.1-201ENST00000515358 464 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC090502.2-201ENST00000549267 280 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 CYCSP2-201ENST00000558168 301 ntBASIC5.72□□□□□ -1.49
RAPGEF3O95398 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms