Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.9□□□□□ -1.95
SCN2BO60939 MIR622-201ENST00000638396 96 ntBASIC2.9□□□□□ -1.95
SCN2BO60939 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
SCN2BO60939 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCN2BO60939 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
SCN2BO60939 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SCN2BO60939 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN2BO60939 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN2BO60939 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN2BO60939 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SCN2BO60939 RNA5SP72-201ENST00000364442 117 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 CD24P4-201ENST00000382840 243 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 RNU6-1027P-201ENST00000383998 107 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 RNU6-1226P-201ENST00000384317 107 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 RPL5P18-201ENST00000406671 891 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AL353692.2-201ENST00000407054 335 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN2BO60939 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN2BO60939 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN2BO60939 AC109925.1-201ENST00000478069 331 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SCN2BO60939 CIR1P1-201ENST00000524055 1133 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AP001804.3-201ENST00000525146 880 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.89□□□□□ -1.95
SCN2BO60939 OR4A45P-201ENST00000529954 901 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN2BO60939 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN2BO60939 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.89□□□□□ -1.95
SCN2BO60939 UBL5P2-201ENST00000583788 219 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 DUXAP4-201ENST00000603046 613 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 CR589904.2-201ENST00000612533 440 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 MIR7975-201ENST00000619350 68 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 MIR6075-201ENST00000620782 95 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AC244100.1-202ENST00000621554 382 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AL360181.4-201ENST00000621752 134 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.89□□□□□ -1.95
SCN2BO60939 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AC009487.2-201ENST00000420969 6821 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 AL035425.3-201ENST00000564206 4996 ntBASIC2.89□□□□□ -1.95
SCN2BO60939 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN2BO60939 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 AC090740.1-201ENST00000623193 2262 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN2BO60939 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 SNORA71.3-201ENST00000362582 128 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 RNU6-1249P-201ENST00000363237 111 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 SNORD15B-201ENST00000384714 146 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AL589655.1-201ENST00000405398 482 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AL031121.1-201ENST00000406553 254 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 RNU4-47P-201ENST00000410876 114 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC096632.1-201ENST00000427395 310 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC005326.1-201ENST00000429197 123 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC104332.2-201ENST00000429959 156 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC016696.1-201ENST00000446949 318 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 BTF3P5-201ENST00000457252 467 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 RN7SL863P-201ENST00000462370 296 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 RPL7P49-201ENST00000471402 708 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN2BO60939 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.88□□□□□ -1.95
SCN2BO60939 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 OSBPL9P3-201ENST00000534523 595 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.88□□□□□ -1.95
SCN2BO60939 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC092474.3-201ENST00000603022 568 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC004775.1-201ENST00000607389 753 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AL355810.1-201ENST00000614629 552 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC009032.1-201ENST00000617574 431 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC073348.1-201ENST00000623002 331 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AP000676.4-201ENST00000624659 623 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 AC092608.3-201ENST00000625017 386 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SCN2BO60939 AC083865.1-201ENST00000636634 831 ntBASIC2.88□□□□□ -1.95
SCN2BO60939 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SCN2BO60939 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms