Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RN7SL812P-201ENST00000493791 279 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 CEACAMP10-202ENST00000495431 496 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AC117522.3-201ENST00000507974 584 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 PANCR-202ENST00000513690 448 ntTSL 2 BASIC5.43□□□□□ -1.54
SRGAP3O43295 RN7SKP283-201ENST00000517197 270 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 BNIP3P11-201ENST00000603878 563 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 AL354984.3-201ENST00000604803 325 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AC243773.3-201ENST00000613270 256 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 AC140479.6-201ENST00000633535 357 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.43□□□□□ -1.54
SRGAP3O43295 AC006378.2-201ENST00000623178 2476 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.43□□□□□ -1.54
SRGAP3O43295 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SRGAP3O43295 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SRGAP3O43295 ASNSP1-204ENST00000641977 1664 ntBASIC5.43□□□□□ -1.54
SRGAP3O43295 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SRGAP3O43295 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SRGAP3O43295 LINC01355-201ENST00000566551 5444 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC015813.6-201ENST00000624409 5808 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SRGAP3O43295 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SRGAP3O43295 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 SNRPEP3-201ENST00000338402 276 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 Y_RNA.548-201ENST00000384656 105 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AL121972.1-201ENST00000402023 252 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 MIR320C1-201ENST00000408566 88 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC073264.1-201ENST00000411508 416 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AL358176.3-201ENST00000420757 454 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 TRGVB-201ENST00000453257 471 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC087312.1-201ENST00000471411 480 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC023598.1-201ENST00000472521 361 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AC112204.1-201ENST00000502591 103 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 RNU6-1281P-201ENST00000516223 105 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AP003467.2-201ENST00000520175 319 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AL512310.1-201ENST00000548639 172 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC090515.3-201ENST00000560431 315 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.42□□□□□ -1.54
SRGAP3O43295 MIR4637-201ENST00000582405 84 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 MIR4795-201ENST00000584182 89 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AL035413.2-201ENST00000604801 525 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 BNIP3P10-201ENST00000605360 577 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC091979.2-201ENST00000607514 214 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC135507.2-201ENST00000612443 309 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 MIR7973-1-201ENST00000614683 76 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AL021997.2-201ENST00000615674 271 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 AC139792.3-201ENST00000623525 224 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SRGAP3O43295 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.42□□□□□ -1.54
SRGAP3O43295 AC138915.3-201ENST00000562908 1389 ntBASIC5.42□□□□□ -1.54
SRGAP3O43295 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.42□□□□□ -1.54
SRGAP3O43295 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.41□□□□□ -1.54
SRGAP3O43295 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 LINC00561-201ENST00000565815 2738 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.41□□□□□ -1.54
SRGAP3O43295 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
SRGAP3O43295 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 RNU1-20P-201ENST00000363314 162 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 U8.3-201ENST00000363321 132 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 Y_RNA.142-201ENST00000363491 102 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RNU6-777P-201ENST00000364265 104 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RNU6-692P-201ENST00000384496 107 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 MIR506-201ENST00000384998 124 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SRGAP3O43295 AL359704.1-201ENST00000411586 781 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC011933.1-201ENST00000413334 321 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 JKAMPP1-201ENST00000413804 919 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 NANOGP6-201ENST00000429190 847 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.41□□□□□ -1.54
SRGAP3O43295 AC116533.1-201ENST00000459748 321 ntBASIC5.41□□□□□ -1.54
SRGAP3O43295 RN7SL303P-201ENST00000469773 251 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms