Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CUX2O14529 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUX2O14529 SNORA46-201ENST00000384762 135 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AL512504.1-201ENST00000415494 778 ntBASIC4.62□□□□□ -1.67
CUX2O14529 HMGB1P48-201ENST00000446155 598 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC093278.1-201ENST00000494700 600 ntBASIC4.62□□□□□ -1.67
CUX2O14529 RNU6-889P-201ENST00000517189 103 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.62□□□□□ -1.67
CUX2O14529 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUX2O14529 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CUX2O14529 LINC00216-201ENST00000623548 1126 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC104820.1-201ENST00000624183 307 ntBASIC4.62□□□□□ -1.67
CUX2O14529 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUX2O14529 AC083799.1-201ENST00000366451 910 ntBASIC4.62□□□□□ -1.67
CUX2O14529 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CUX2O14529 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CUX2O14529 RNU6-321P-201ENST00000410912 106 ntBASIC4.62□□□□□ -1.67
CUX2O14529 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.62□□□□□ -1.67
CUX2O14529 AL450263.2-201ENST00000439400 589 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC125238.1-201ENST00000448842 249 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC243772.1-201ENST00000451620 410 ntBASIC4.62□□□□□ -1.67
CUX2O14529 OR6K1P-201ENST00000456766 971 ntBASIC4.62□□□□□ -1.67
CUX2O14529 RPL23AP42-201ENST00000471152 471 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC068587.2-201ENST00000478386 781 ntBASIC4.62□□□□□ -1.67
CUX2O14529 RN7SL633P-201ENST00000488974 297 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC078817.1-201ENST00000492623 435 ntBASIC4.62□□□□□ -1.67
CUX2O14529 FABP5P6-201ENST00000510588 409 ntBASIC4.62□□□□□ -1.67
CUX2O14529 RNU6-760P-201ENST00000516078 97 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.62□□□□□ -1.67
CUX2O14529 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC009163.5-201ENST00000575421 637 ntBASIC4.62□□□□□ -1.67
CUX2O14529 AC068313.1-201ENST00000604028 1008 ntBASIC4.62□□□□□ -1.67
CUX2O14529 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.62□□□□□ -1.67
CUX2O14529 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CUX2O14529 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CUX2O14529 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CUX2O14529 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CUX2O14529 NCSTNP1-201ENST00000406229 144 ntBASIC4.61□□□□□ -1.67
CUX2O14529 RNA5SP274-201ENST00000410484 108 ntBASIC4.61□□□□□ -1.67
CUX2O14529 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.61□□□□□ -1.67
CUX2O14529 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CUX2O14529 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CUX2O14529 TRBV1-201ENST00000476502 284 ntBASIC4.61□□□□□ -1.67
CUX2O14529 AC068657.1-201ENST00000520807 306 ntBASIC4.61□□□□□ -1.67
CUX2O14529 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.61□□□□□ -1.67
CUX2O14529 AC010928.3-201ENST00000587712 541 ntBASIC4.61□□□□□ -1.67
CUX2O14529 AC100814.1-201ENST00000606963 623 ntBASIC4.61□□□□□ -1.67
CUX2O14529 snoU13.31-201ENST00000607291 104 ntBASIC4.61□□□□□ -1.67
CUX2O14529 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUX2O14529 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CUX2O14529 AC104454.1-201ENST00000421341 1401 ntBASIC4.6□□□□□ -1.67
CUX2O14529 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
CUX2O14529 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CUX2O14529 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CUX2O14529 RN7SKP58-201ENST00000411010 305 ntBASIC4.6□□□□□ -1.67
CUX2O14529 RPL23AP14-201ENST00000468281 468 ntBASIC4.6□□□□□ -1.67
CUX2O14529 AC116337.1-201ENST00000509680 687 ntBASIC4.6□□□□□ -1.67
CUX2O14529 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.6□□□□□ -1.67
CUX2O14529 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.6□□□□□ -1.67
CUX2O14529 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.6□□□□□ -1.67
CUX2O14529 AL109741.3-201ENST00000561748 592 ntBASIC4.6□□□□□ -1.67
CUX2O14529 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CUX2O14529 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.6□□□□□ -1.67
CUX2O14529 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.6□□□□□ -1.67
CUX2O14529 PWAR6-201ENST00000552334 4618 ntBASIC4.6□□□□□ -1.67
CUX2O14529 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CUX2O14529 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CUX2O14529 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CUX2O14529 AC107081.3-201ENST00000612715 2034 ntBASIC4.59□□□□□ -1.67
CUX2O14529 RNU1-73P-201ENST00000383971 164 ntBASIC4.59□□□□□ -1.67
CUX2O14529 RPL26P37-201ENST00000411983 438 ntBASIC4.59□□□□□ -1.67
CUX2O14529 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.59□□□□□ -1.67
CUX2O14529 RPL23AP16-201ENST00000441715 421 ntBASIC4.59□□□□□ -1.67
CUX2O14529 AC245517.2-201ENST00000442890 346 ntBASIC4.59□□□□□ -1.67
CUX2O14529 MTND3P4-201ENST00000453537 303 ntBASIC4.59□□□□□ -1.67
CUX2O14529 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.59□□□□□ -1.67
CUX2O14529 IGKV2D-23-201ENST00000518179 286 ntBASIC4.59□□□□□ -1.67
CUX2O14529 AC090953.1-201ENST00000604305 1092 ntBASIC4.59□□□□□ -1.67
CUX2O14529 AP004372.1-201ENST00000604842 844 ntBASIC4.59□□□□□ -1.67
CUX2O14529 BX322635.1-201ENST00000605804 496 ntBASIC4.59□□□□□ -1.67
CUX2O14529 AC092628.2-201ENST00000622492 339 ntBASIC4.59□□□□□ -1.67
CUX2O14529 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CUX2O14529 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CUX2O14529 AC009302.1-201ENST00000417147 390 ntBASIC4.58□□□□□ -1.68
CUX2O14529 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.58□□□□□ -1.68
CUX2O14529 CASP3P1-201ENST00000446037 609 ntBASIC4.58□□□□□ -1.68
CUX2O14529 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CUX2O14529 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.58□□□□□ -1.68
CUX2O14529 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.58□□□□□ -1.68
CUX2O14529 CLIC4P1-201ENST00000453177 535 ntBASIC4.58□□□□□ -1.68
CUX2O14529 RPS27P29-201ENST00000463110 252 ntBASIC4.58□□□□□ -1.68
CUX2O14529 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.58□□□□□ -1.68
CUX2O14529 AC118282.1-201ENST00000506408 765 ntBASIC4.58□□□□□ -1.68
CUX2O14529 AC119751.1-201ENST00000513357 765 ntBASIC4.58□□□□□ -1.68
CUX2O14529 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms